Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s007.g0438.t1 | MEIOTIC RECOMBINATION PROTEIN SPO11 |
Lsat_s007.g0439.t1 | MICROCEPHALIN |
Lsat_s007.g0440.t1 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Lsat_s007.g0441.t1 | CELL FATE DETERMINING PROTEIN MAB21-RELATED |
Lsat_s007.g0442.t1 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 10 |
Lsat_s007.g0443.t1 | 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED |
Lsat_s007.g0444.t1 | UNCHARACTERIZED |
Lsat_s007.g0445.t1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E |
Lsat_s007.g0446.t1 | |
Lsat_s007.g0447.t1 | |
Lsat_s007.g0448.t1 | NEUROHYPOPHYSIAL HORMONES, N-TERMINAL DOMAIN CONTAINING PROTEIN |
Lsat_s007.g0449.t1 | |
Lsat_s007.g0450.t1 | AMINO ACID TRANSPORTER |
Lsat_s007.g0451.t1 | |
Lsat_s007.g0452.t1 | |
Lsat_s007.g0453.t1 | |
Lsat_s007.g0454.t1 | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN |
Lsat_s007.g0455.t1 | |
Lsat_s007.g0456.t1 | |
Lsat_s007.g0457.t1 | INTEGRASE CORE DOMAIN CONTAINING PROTEIN |
Lsat_s007.g0458.t1 | |
Lsat_s007.g0459.t1 | |
Lsat_s007.g0460.t1 | PROTEIN CBG10425 |
Lsat_s007.g0461.t1 | HILLARIN |
Lsat_s007.g0462.t1 | HILLARIN |
Lsat_s007.g0463.t1 | RWD DOMAIN-CONTAINING PROTEIN 3 |
Lsat_s007.g0464.t1 | AGAP007537-PB |
Lsat_s007.g0465.t1 | RENIN RECEPTOR |
Lsat_s007.g0466.t1 | METALLOENDOPEPTIDASE OMA1 |
Lsat_s007.g0467.t1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
Lsat_s007.g0468.t1 | UNCHARACTERIZED |
Lsat_s007.g0469.t1 | CASPASE ACTIVITY AND APOPTOSIS INHIBITOR 1 |
Lsat_s007.g0470.t1 | |
Lsat_s007.g0471.t1 | |
Lsat_s007.g0472.t1 | |
Lsat_s007.g0473.t1 | |
Lsat_s007.g0474.t1 | |
Lsat_s007.g0475.t1 | |
Lsat_s007.g0476.t1 | |
Lsat_s007.g0477.t1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
Lsat_s007.g0478.t1 | CYTOSOLIC CARBOXYPEPTIDASE |
Lsat_s007.g0479.t1 | DNA-DIRECTED RNA POLYMERASE |
Lsat_s007.g0480.t1 | HILLARIN |
Lsat_s007.g0481.t1 | HILLARIN |
Lsat_s007.g0482.t1 | HILLARIN |
Lsat_s007.g0483.t1 | HILLARIN |
Lsat_s007.g0484.t1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
Lsat_s007.g0485.t1 | CABIT DOMAIN-CONTAINING PROTEIN |
Lsat_s007.g0486.t1 | HILLARIN |
Lsat_s007.g0487.t1 | HILLARIN |