About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s007.g0588.t1
Lsat_s007.g0589.t1SHC TRANSFORMING PROTEIN
Lsat_s007.g0590.t1RALA BINDING PROTEIN 1 RALBP1
Lsat_s007.g0591.t1CYSTEINE DIOXYGENASE
Lsat_s007.g0592.t1ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY
Lsat_s007.g0593.t1
Lsat_s007.g0594.t1
Lsat_s007.g0595.t1PROTEIN EVA-1
Lsat_s007.g0596.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s007.g0597.t1
Lsat_s007.g0598.t1PROTEIN EVA-1
Lsat_s007.g0599.t1
Lsat_s007.g0600.t1COMM DOMAIN-CONTAINING PROTEIN 4-8 FAMILY MEMBER
Lsat_s007.g0601.t150S RIBOSOMAL PROTEIN L9
Lsat_s007.g0602.t1RIBOFLAVIN KINASE/FMN ADENYLYLTRANSFERASE
Lsat_s007.g0603.t1TRANSMEMBRANE PROTEIN 65
Lsat_s007.g0604.t1
Lsat_s007.g0605.t1ZINC FINGER PROTEIN
Lsat_s007.g0606.t1KN MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING
Lsat_s007.g0607.t1BA1-643
Lsat_s007.g0608.t1TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
Lsat_s007.g0609.t1SOSS COMPLEX SUBUNIT C
Lsat_s007.g0610.t1SORTING NEXIN-4
Lsat_s007.g0611.t1DDB1- AND CUL4-ASSOCIATED FACTOR 15
Lsat_s007.g0612.t1XK-RELATED PROTEIN
Lsat_s007.g0613.t1SYNAPSE-ASSOCIATED PROTEIN
Lsat_s007.g0614.t1
Lsat_s007.g0615.t1
Lsat_s007.g0616.t1SOX TRANSCRIPTION FACTOR
Lsat_s007.g0617.t1
Lsat_s007.g0618.t1
Lsat_s007.g0619.t1
Lsat_s007.g0620.t1
Lsat_s007.g0621.t1ACROSIN-RELATED
Lsat_s007.g0622.t1
Lsat_s007.g0623.t1ACROSIN-RELATED
Lsat_s007.g0624.t1ATP-DEPENDENT DNA HELICASE
Lsat_s007.g0625.t1ADDITIONAL SEX COMBS LIKE PROTEIN ASXL
Lsat_s007.g0626.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 178
Lsat_s007.g0627.t1CYSTEINE PROTEASE FAMILY C1-RELATED
Lsat_s007.g0628.t1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Lsat_s007.g0629.t1GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Lsat_s007.g0630.t1DEATH DOMAIN-CONTAINING PROTEIN
Lsat_s007.g0631.t1
Lsat_s007.g0632.t1DEATH DOMAIN-CONTAINING PROTEIN
Lsat_s007.g0633.t1
Lsat_s007.g0634.t1
Lsat_s007.g0635.t1GASTRULATION DEFECTIVE PROTEIN 1-RELATED
Lsat_s007.g0636.t1ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2
Lsat_s007.g0637.t1
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