About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s007.g0488.t1
Lsat_s007.g0489.t1ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
Lsat_s007.g0490.t1
Lsat_s007.g0491.t1S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED
Lsat_s007.g0492.t1ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
Lsat_s007.g0493.t1PROTEIN CBG10425
Lsat_s007.g0494.t1INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Lsat_s007.g0495.t1
Lsat_s007.g0496.t1THIOESTERASE 1/PROTEASE 1/LYSOPHOSPHOLIPASE L1
Lsat_s007.g0497.t1
Lsat_s007.g0498.t1-
Lsat_s007.g0499.t1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Lsat_s007.g0500.t1RIBOSOMAL PROTEIN L13
Lsat_s007.g0501.t1
Lsat_s007.g0502.t1
Lsat_s007.g0503.t1SI:CH211-266K2.1
Lsat_s007.g0504.t1
Lsat_s007.g0505.t1
Lsat_s007.g0506.t1
Lsat_s007.g0507.t1
Lsat_s007.g0508.t1
Lsat_s007.g0509.t1
Lsat_s007.g0510.t1
Lsat_s007.g0511.t1
Lsat_s007.g0512.t1
Lsat_s007.g0513.t1
Lsat_s007.g0514.t1
Lsat_s007.g0515.t1DNA-BINDING PROTEIN INHIBITOR
Lsat_s007.g0516.t1
Lsat_s007.g0517.t1
Lsat_s007.g0518.t1ADP-RIBOSYLATION FACTOR-RELATED PROTEIN 1
Lsat_s007.g0519.t1DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE
Lsat_s007.g0520.t1INOSITOL POLYPHOSPHATE KINASE
Lsat_s007.g0521.t1ANKYRIN REPEAT-CONTAINING
Lsat_s007.g0522.t1DIMETHYLADENOSINE TRANSFERASE
Lsat_s007.g0523.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s007.g0524.t1VESICLE PROTEIN SORTING-ASSOCIATED
Lsat_s007.g0525.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 152
Lsat_s007.g0526.t1SPINDLE AND CENTRIOLE ASSOCIATED PROTEIN 1 SPICE1
Lsat_s007.g0527.t1E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER
Lsat_s007.g0528.t1DNAJ-LIKE-2, ISOFORM A-RELATED
Lsat_s007.g0529.t1CENTROSOMAL PROTEIN OF 78 KDA
Lsat_s007.g0530.t1
Lsat_s007.g0531.t1CADHERIN DOMAIN-CONTAINING PROTEIN
Lsat_s007.g0532.t1CENTROSOMAL PROTEIN OF 78 KDA
Lsat_s007.g0533.t1
Lsat_s007.g0534.t1KICSTOR COMPLEX PROTEIN SZT2
Lsat_s007.g0535.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 8
Lsat_s007.g0536.t1
Lsat_s007.g0537.t1
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