Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s007.g0688.t1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 46 |
Lsat_s007.g0689.t1 | VESICULAR MANNOSE-BINDING LECTIN |
Lsat_s007.g0690.t1 | CDK2-ASSOCIATED AND CULLIN DOMAIN-CONTAINING PROTEIN 1 |
Lsat_s007.g0691.t1 | |
Lsat_s007.g0692.t1 | TRANSMEMBRANE PROTEIN 180 |
Lsat_s007.g0693.t1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
Lsat_s007.g0694.t1 | |
Lsat_s007.g0695.t1 | ZIPPER PUTATIVE TUMOR SUPPRESSOR 2 HOMOLOG-LIKE PROTEIN-RELATED |
Lsat_s007.g0696.t1 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
Lsat_s007.g0697.t1 | RAI16 PROTEIN-RELATED |
Lsat_s007.g0698.t1 | PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT |
Lsat_s007.g0699.t1 | RAI16 PROTEIN-RELATED |
Lsat_s007.g0700.t1 | |
Lsat_s007.g0701.t1 | |
Lsat_s007.g0702.t1 | |
Lsat_s007.g0703.t1 | |
Lsat_s007.g0704.t1 | PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR |
Lsat_s007.g0705.t1 | |
Lsat_s007.g0706.t1 | |
Lsat_s007.g0707.t1 | |
Lsat_s007.g0708.t1 | |
Lsat_s007.g0709.t1 | |
Lsat_s007.g0710.t1 | |
Lsat_s007.g0711.t1 | IRE1-RELATED |
Lsat_s007.g0712.t1 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Lsat_s007.g0713.t1 | BETA/GAMMA CRYSTALLIN |
Lsat_s007.g0714.t1 | CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR |
Lsat_s007.g0715.t1 | T-BOX PROTEIN-RELATED |
Lsat_s007.g0716.t1 | |
Lsat_s007.g0717.t1 | METAXIN RELATED |
Lsat_s007.g0718.t1 | METAXIN RELATED |
Lsat_s007.g0719.t1 | METAXIN RELATED |
Lsat_s007.g0720.t1 | METAXIN RELATED |
Lsat_s007.g0721.t1 | METAXIN RELATED |
Lsat_s007.g0722.t1 | UNCHARACTERIZED |
Lsat_s007.g0723.t1 | |
Lsat_s007.g0724.t1 | AP-5 COMPLEX SUBUNIT SIGMA-1 |
Lsat_s007.g0725.t1 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
Lsat_s007.g0726.t1 | RING FINGER PROTEIN 37 |
Lsat_s007.g0727.t1 | GUANYLYL CYCLASE |
Lsat_s007.g0728.t1 | BONUS, ISOFORM C-RELATED |
Lsat_s007.g0729.t1 | |
Lsat_s007.g0730.t1 | |
Lsat_s007.g0731.t1 | GUANYLYL CYCLASE |
Lsat_s007.g0732.t1 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
Lsat_s007.g0733.t1 | SWIM-TYPE DOMAIN-CONTAINING PROTEIN |
Lsat_s007.g0734.t1 | |
Lsat_s007.g0735.t1 | |
Lsat_s007.g0736.t1 | |
Lsat_s007.g0737.t1 |