About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s007.g0688.t1CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 46
Lsat_s007.g0689.t1VESICULAR MANNOSE-BINDING LECTIN
Lsat_s007.g0690.t1CDK2-ASSOCIATED AND CULLIN DOMAIN-CONTAINING PROTEIN 1
Lsat_s007.g0691.t1
Lsat_s007.g0692.t1TRANSMEMBRANE PROTEIN 180
Lsat_s007.g0693.t1ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Lsat_s007.g0694.t1
Lsat_s007.g0695.t1ZIPPER PUTATIVE TUMOR SUPPRESSOR 2 HOMOLOG-LIKE PROTEIN-RELATED
Lsat_s007.g0696.t1PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT
Lsat_s007.g0697.t1RAI16 PROTEIN-RELATED
Lsat_s007.g0698.t1PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT
Lsat_s007.g0699.t1RAI16 PROTEIN-RELATED
Lsat_s007.g0700.t1
Lsat_s007.g0701.t1
Lsat_s007.g0702.t1
Lsat_s007.g0703.t1
Lsat_s007.g0704.t1PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR
Lsat_s007.g0705.t1
Lsat_s007.g0706.t1
Lsat_s007.g0707.t1
Lsat_s007.g0708.t1
Lsat_s007.g0709.t1
Lsat_s007.g0710.t1
Lsat_s007.g0711.t1IRE1-RELATED
Lsat_s007.g0712.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s007.g0713.t1BETA/GAMMA CRYSTALLIN
Lsat_s007.g0714.t1CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR
Lsat_s007.g0715.t1T-BOX PROTEIN-RELATED
Lsat_s007.g0716.t1
Lsat_s007.g0717.t1METAXIN RELATED
Lsat_s007.g0718.t1METAXIN RELATED
Lsat_s007.g0719.t1METAXIN RELATED
Lsat_s007.g0720.t1METAXIN RELATED
Lsat_s007.g0721.t1METAXIN RELATED
Lsat_s007.g0722.t1UNCHARACTERIZED
Lsat_s007.g0723.t1
Lsat_s007.g0724.t1AP-5 COMPLEX SUBUNIT SIGMA-1
Lsat_s007.g0725.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s007.g0726.t1RING FINGER PROTEIN 37
Lsat_s007.g0727.t1GUANYLYL CYCLASE
Lsat_s007.g0728.t1BONUS, ISOFORM C-RELATED
Lsat_s007.g0729.t1
Lsat_s007.g0730.t1
Lsat_s007.g0731.t1GUANYLYL CYCLASE
Lsat_s007.g0732.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s007.g0733.t1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s007.g0734.t1
Lsat_s007.g0735.t1
Lsat_s007.g0736.t1
Lsat_s007.g0737.t1
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