Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8045071.1 | POTE ANKYRIN DOMAIN |
| CAI8045068.1 | MOLTING PROTEIN MLT-4 |
| CAI8045067.1 | ANKYRIN REPEAT CONTAINING |
| CAI8045066.1 | ANKYRIN REPEAT-CONTAINING |
| CAI8045065.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8045064.1 | |
| CAI8045077.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| CAI8045079.1 | ANKYRIN REPEAT, SAM AND BASIC LEUCINE ZIPPER DOMAIN-CONTAINING PROTEIN 1 |
| CAI8045078.1 | ANKYRIN REPEAT PROTEIN |
| CAI8045081.1 | KINASE D-INTERACTING SUBSTRATE OF 220 KDA |
| CAI8045080.1 | ANKYRIN REPEAT FAMILY A |
| CAI8045082.1 | |
| CAI8045083.1 | |
| CAI8045084.1 | |
| CAI8045085.1 | |
| CAI8045089.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8045088.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8045087.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8045086.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8045090.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| CAI8045094.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8045093.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8045092.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8045091.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8045095.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8045097.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8045096.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8045098.1 | LEUCINE AMINOPEPTIDASE-RELATED |
| CAI8045099.1 | INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG |
| CAI8045100.1 | INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG |
| CAI8045101.1 | INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG |
| CAI8045102.1 | PROTEIN PHOSPHATASE 1 INHIBITOR POTENTIATED BY PROTEIN KINASE C |
| CAI8045105.1 | |
| CAI8045104.1 | |
| CAI8045103.1 | |
| CAI8045106.1 | |
| CAI8045107.1 | METALLOPHOSPHOESTERASE |
| CAI8045108.1 | HEN1 |
| CAI8045110.1 | |
| CAI8045109.1 | |
| CAI8045111.1 | |
| CAI8045112.1 | |
| CAI8045113.1 | |
| CAI8045114.1 | PEPTIDASE S12 |
| CAI8045117.1 | METHIONINE AMINOPEPTIDASE |
| CAI8045116.1 | METHIONINE AMINOPEPTIDASE |
| CAI8045115.1 | METHIONINE AMINOPEPTIDASE |
| CAI8045118.1 | N UTILIZATION SUBSTANCE PROTEIN B-RELATED |
| CAI8045119.1 | |
| CAI8045120.1 | PEPTIDYLPROLYL ISOMERASE |
