About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8044921.1MYOTROPHIN
CAI8044922.1MYOTROPHIN
CAI8044923.1PROLACTIN REGULATORY ELEMENT BINDING PROTEIN
CAI8044924.1PROLACTIN REGULATORY ELEMENT BINDING PROTEIN
CAI8044925.1PROLACTIN REGULATORY ELEMENT BINDING PROTEIN
CAI8044926.1
CAI8044930.1RAB GDP/GTP EXCHANGE FACTOR
CAI8044929.1RAB GDP/GTP EXCHANGE FACTOR
CAI8044928.1RAB GDP/GTP EXCHANGE FACTOR
CAI8044927.1
CAI8044931.1RAB GDP/GTP EXCHANGE FACTOR
CAI8044932.1
CAI8044933.1
CAI8044934.1
CAI8044935.1
CAI8044936.1TRNA (CYTOSINE(38)-C(5))-METHYLTRANSFERASE
CAI8044937.1UDP-N-ACETYL-2-AMINO-2-DEOXY-D-GLUCURONATE OXIDASE
CAI8044938.1UDP-N-ACETYL-2-AMINO-2-DEOXY-D-GLUCURONATE OXIDASE
CAI8044942.1
CAI8044941.1
CAI8044940.1
CAI8044939.1
CAI8044943.1
CAI8044944.1
CAI8044945.1
CAI8044946.1
CAI8044948.1TYROSINE-PROTEIN KINASE RECEPTOR
CAI8044947.1TYROSINE-PROTEIN KINASE RECEPTOR
CAI8044949.1
CAI8044950.1
CAI8044953.1
CAI8044952.1
CAI8044951.1
CAI8044954.1
CAI8044955.1
CAI8044957.1
CAI8044956.1
CAI8044958.1
CAI8044959.1
CAI8044963.1
CAI8044962.1
CAI8044961.1
CAI8044960.1
CAI8044964.1
CAI8044965.1
CAI8044966.1
CAI8044967.1
CAI8044968.1
CAI8044969.1
CAI8044970.1
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