Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8044971.1 | |
| CAI8044972.1 | KYNURENINE 3-MONOOXYGENASE |
| CAI8044973.1 | KYNURENINE 3-MONOOXYGENASE |
| CAI8044974.1 | |
| CAI8044975.1 | |
| CAI8044976.1 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
| CAI8044977.1 | FLUORIDE EXPORT PROTEIN 1-RELATED |
| CAI8044978.1 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| CAI8044979.1 | TRANSAMIDASE |
| CAI8044980.1 | SUGAR KINASE |
| CAI8044981.1 | |
| CAI8044984.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8044983.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8044985.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8044982.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8044986.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8044987.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8044994.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8044990.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8044995.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8044992.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8044991.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8044997.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8044996.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8044993.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8044989.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8044988.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8044998.1 | C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN |
| CAI8044999.1 | |
| CAI8045002.1 | FORMIMINOTRANSFERASE-CYCLODEAMINASE |
| CAI8045000.1 | FORMIMINOTRANSFERASE-CYCLODEAMINASE |
| CAI8045001.1 | FORMIMINOTRANSFERASE-CYCLODEAMINASE |
| CAI8045003.1 | |
| CAI8045005.1 | MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED |
| CAI8045004.1 | MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED |
| CAI8045006.1 | CALCIUM BINDING PROTEINS |
| CAI8045007.1 | |
| CAI8045010.1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| CAI8045009.1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| CAI8045008.1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| CAI8045011.1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| CAI8045012.1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| CAI8045013.1 | |
| CAI8045016.1 | SULFATE TRANSPORTER |
| CAI8045017.1 | SULFATE TRANSPORTER |
| CAI8045019.1 | SULFATE TRANSPORTER |
| CAI8045018.1 | SULFATE TRANSPORTER |
| CAI8045014.1 | |
| CAI8045015.1 | |
| CAI8045020.1 | SULFATE TRANSPORTER |
