Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8044869.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8044872.1 | |
| CAI8044876.1 | KINESIN-RELATED |
| CAI8044875.1 | KINESIN-RELATED |
| CAI8044874.1 | KINESIN-RELATED |
| CAI8044873.1 | KINESIN-RELATED |
| CAI8044878.1 | |
| CAI8044877.1 | |
| CAI8044879.1 | |
| CAI8044880.1 | |
| CAI8044881.1 | |
| CAI8044885.1 | |
| CAI8044883.1 | |
| CAI8044884.1 | |
| CAI8044882.1 | |
| CAI8044886.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| CAI8044887.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| CAI8044888.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8044889.1 | |
| CAI8044890.1 | |
| CAI8044893.1 | |
| CAI8044891.1 | |
| CAI8044892.1 | |
| CAI8044895.1 | |
| CAI8044894.1 | |
| CAI8044896.1 | |
| CAI8044897.1 | |
| CAI8044898.1 | OS05G0143600 PROTEIN |
| CAI8044904.1 | CENTROSOMAL PROTEIN-RELATED |
| CAI8044902.1 | CENTROSOMAL PROTEIN-RELATED |
| CAI8044901.1 | CENTROSOMAL PROTEIN-RELATED |
| CAI8044900.1 | |
| CAI8044899.1 | |
| CAI8044905.1 | CENTROSOMAL PROTEIN-RELATED |
| CAI8044903.1 | |
| CAI8044906.1 | CENTROSOMAL PROTEIN-RELATED |
| CAI8044908.1 | STABILIN |
| CAI8044907.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8044909.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8044910.1 | |
| CAI8044911.1 | |
| CAI8044912.1 | |
| CAI8044913.1 | LAMININ G-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8044914.1 | |
| CAI8044915.1 | CYTOCHROME B561/FERRIC REDUCTASE TRANSMEMBRANE |
| CAI8044916.1 | |
| CAI8044919.1 | CENTROSOMAL PROTEIN-RELATED |
| CAI8044918.1 | CENTROSOMAL PROTEIN-RELATED |
| CAI8044917.1 | CENTROSOMAL PROTEIN-RELATED |
| CAI8044920.1 | CENTROSOMAL PROTEIN-RELATED |
