Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8044322.1 | |
| CAI8044321.1 | |
| CAI8044323.1 | ARRESTIN DOMAIN CONTAINING PROTEIN |
| CAI8044325.1 | METALLO PHOSPHOESTERASE RELATED |
| CAI8044326.1 | METALLO PHOSPHOESTERASE RELATED |
| CAI8044324.1 | METALLO PHOSPHOESTERASE RELATED |
| CAI8044327.1 | METALLO PHOSPHOESTERASE RELATED |
| CAI8044329.1 | |
| CAI8044328.1 | |
| CAI8044330.1 | COATOMER SUBUNIT BETA |
| CAI8044331.1 | COATOMER SUBUNIT BETA |
| CAI8044332.1 | |
| CAI8044334.1 | HIGH MOBILITY GROUP PROTEIN 2 |
| CAI8044333.1 | |
| CAI8044337.1 | |
| CAI8044336.1 | CALCYPHOSIN |
| CAI8044335.1 | |
| CAI8044338.1 | |
| CAI8044341.1 | |
| CAI8044339.1 | |
| CAI8044340.1 | |
| CAI8044342.1 | |
| CAI8044343.1 | |
| CAI8044344.1 | |
| CAI8044345.1 | |
| CAI8044346.1 | |
| CAI8044347.1 | |
| CAI8044350.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8044351.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8044348.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8044349.1 | |
| CAI8044352.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8044353.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8044354.1 | |
| CAI8044356.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8044355.1 | D-ALANYL-D-ALANINE CARBOXYPEPTIDASE |
| CAI8044357.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8044358.1 | COATOMER SUBUNIT DELTA |
| CAI8044359.1 | COATOMER SUBUNIT DELTA |
| CAI8044360.1 | VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A |
| CAI8044361.1 | HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 |
| CAI8044362.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| CAI8044363.1 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
| CAI8044364.1 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
| CAI8044365.1 | DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED |
| CAI8044366.1 | |
| CAI8044367.1 | DNA2/NAM7 HELICASE FAMILY MEMBER |
| CAI8044368.1 | RIBONUCLEASE |
| CAI8044369.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8044370.1 |
