Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8043621.1 | PARTNER OF SLD5 |
| CAI8043622.1 | MULTI-COPPER OXIDASE |
| CAI8043623.1 | THIAMINE PYROPHOSPHATE ENZYMES |
| CAI8043624.1 | THIAMINE BIOSYNTHESIS PROTEIN THIC |
| CAI8043625.1 | SODIUM/PROLINE SYMPORTER-RELATED |
| CAI8043626.1 | ALKANESULFONATE MONOOXYGENASE |
| CAI8043627.1 | |
| CAI8043628.1 | ALKANESULFONATE MONOOXYGENASE |
| CAI8043629.1 | |
| CAI8043630.1 | |
| CAI8043631.1 | RESISTANCE PROTEIN MDTM, PUTATIVE-RELATED-RELATED |
| CAI8043632.1 | 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE |
| CAI8043633.1 | TRANSLATION ELONGATION FACTOR-RELATED |
| CAI8043634.1 | TRANSLATION ELONGATION FACTOR-RELATED |
| CAI8043635.1 | GLYOXALASE FAMILY PROTEIN |
| CAI8043639.1 | BLR3401 PROTEIN |
| CAI8043638.1 | BLR3401 PROTEIN |
| CAI8043637.1 | BLR3401 PROTEIN |
| CAI8043636.1 | BLR3401 PROTEIN |
| CAI8043640.1 | CHOLINE MONOOXYGENASE, CHLOROPLASTIC |
| CAI8043641.1 | FLAVODOXIN-RELATED PROTEIN WRBA-RELATED |
| CAI8043642.1 | FLAVODOXIN-RELATED PROTEIN WRBA-RELATED |
| CAI8043643.1 | |
| CAI8043644.1 | PUTATIVE (AFU_ORTHOLOGUE AFUA_8G07350)-RELATED |
| CAI8043645.1 | RNA POLYMERASE ECF-TYPE SIGMA FACTO |
| CAI8043646.1 | |
| CAI8043647.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| CAI8043648.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| CAI8043649.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| CAI8043650.1 | |
| CAI8043652.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8043651.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 13 |
| CAI8043653.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8043654.1 | |
| CAI8043655.1 | |
| CAI8043656.1 | PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED |
| CAI8043657.1 | PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED |
| CAI8043658.1 | |
| CAI8043659.1 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| CAI8043660.1 | |
| CAI8043662.1 | FI04035P |
| CAI8043661.1 | FI04035P |
| CAI8043664.1 | FI04035P |
| CAI8043663.1 | FI04035P |
| CAI8043665.1 | FI04035P |
| CAI8043666.1 | FI04035P |
| CAI8043667.1 | FI04035P |
| CAI8043668.1 | FI04035P |
| CAI8043669.1 | FI04035P |
| CAI8043671.1 |
