Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8043471.1 | UNCHARACTERIZED |
| CAI8043472.1 | UNCHARACTERIZED |
| CAI8043474.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |
| CAI8043473.1 | |
| CAI8043475.1 | |
| CAI8043480.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8043479.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8043478.1 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8043477.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8043476.1 | SURFACE ANTIGEN BSPA-LIKE-RELATED |
| CAI8043481.1 | |
| CAI8043483.1 | TENSIN |
| CAI8043482.1 | |
| CAI8043484.1 | |
| CAI8043489.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| CAI8043487.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| CAI8043488.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| CAI8043490.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| CAI8043486.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| CAI8043485.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| CAI8043491.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| CAI8043493.1 | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER |
| CAI8043492.1 | |
| CAI8043494.1 | PROTEIN HID1 |
| CAI8043495.1 | ANKYRIN REPEAT DOMAIN 40 |
| CAI8043496.1 | |
| CAI8043497.1 | |
| CAI8043498.1 | |
| CAI8043500.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8043499.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8043501.1 | |
| CAI8043502.1 | |
| CAI8043503.1 | |
| CAI8043504.1 | |
| CAI8043505.1 | ABC TRANSPORTER PERMEASE PROTEIN |
| CAI8043506.1 | |
| CAI8043507.1 | |
| CAI8043508.1 | |
| CAI8043509.1 | |
| CAI8043510.1 | |
| CAI8043511.1 | TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE |
| CAI8043512.1 | TRNA DIMETHYLALLYLTRANSFERASE |
| CAI8043513.1 | DNA HELICASE RECQ FAMILY MEMBER |
| CAI8043514.1 | |
| CAI8043515.1 | UPF0261 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_1G10120) |
| CAI8043516.1 | |
| CAI8043517.1 | D-GALACTONATE DEHYDRATASE-RELATED |
| CAI8043518.1 | ALDEHYDE DEHYDROGENASE |
| CAI8043520.1 | TRANSLATION ELONGATION FACTOR G-RELATED |
| CAI8043519.1 | TRANSLATION ELONGATION FACTOR G-RELATED |
