Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8043171.1 | PROTEIN SIDEKICK |
| CAI8043172.1 | LIPOPROTEIN-RELATED |
| CAI8043173.1 | RIBD C-TERMINAL DOMAIN CONTAINING PROTEIN |
| CAI8043174.1 | CYTOPLASMIC PROTEIN-RELATED |
| CAI8043175.1 | SLR0285 PROTEIN |
| CAI8043176.1 | ZINC UPTAKE REGULATION PROTEIN |
| CAI8043177.1 | |
| CAI8043178.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| CAI8043179.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| CAI8043180.1 | NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED |
| CAI8043181.1 | ALCOHOL DEHYDROGENASE |
| CAI8043184.1 | LD44762P |
| CAI8043183.1 | LD44762P |
| CAI8043182.1 | LD44762P |
| CAI8043185.1 | LD44762P |
| CAI8043189.1 | LD44762P |
| CAI8043190.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8043188.1 | LD44762P |
| CAI8043187.1 | LD44762P |
| CAI8043186.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8043192.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8043191.1 | LD44762P |
| CAI8043193.1 | LD44762P |
| CAI8043194.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| CAI8043195.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8043196.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8043197.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8043198.1 | THROMBOSPONDIN |
| CAI8043199.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8043200.1 | |
| CAI8043204.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8043202.1 | ANKYRIN REPEAT-CONTAINING |
| CAI8043206.1 | ANKYRIN REPEAT-CONTAINING |
| CAI8043203.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8043201.1 | ANKYRIN REPEAT-CONTAINING |
| CAI8043205.1 | ANKYRIN REPEAT-CONTAINING |
| CAI8043208.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8043207.1 | ANKYRIN REPEAT-CONTAINING |
| CAI8043209.1 | ANKYRIN REPEAT-CONTAINING |
| CAI8043210.1 | SUGAR KINASE |
| CAI8043211.1 | UNCHARACTERIZED |
| CAI8043212.1 | INTERLEUKIN ENHANCER-BINDING FACTOR |
| CAI8043213.1 | |
| CAI8043214.1 | PROTEIN MAGO NASHI HOMOLOG |
| CAI8043215.1 | |
| CAI8043216.1 | |
| CAI8043217.1 | |
| CAI8043218.1 | OS01G0149700 PROTEIN |
| CAI8043219.1 | CELL SURFACE PROTEIN |
| CAI8043220.1 |
