Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8043271.1 | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 |
| CAI8043272.1 | PAREP8-RELATED |
| CAI8043273.1 | HEME OXYGENASE HI_0854-RELATED |
| CAI8043274.1 | TPR-DOMAIN CONTAINING PROTEIN |
| CAI8043277.1 | SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA |
| CAI8043276.1 | SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA |
| CAI8043275.1 | SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA |
| CAI8043278.1 | TRANSAMIDASE |
| CAI8043279.1 | |
| CAI8043280.1 | NADPH NITROREDUCTASE |
| CAI8043281.1 | - |
| CAI8043282.1 | - |
| CAI8043283.1 | ATP-DEPENDENT CLP PROTEASE |
| CAI8043284.1 | ATP-DEPENDENT CLP PROTEASE |
| CAI8043285.1 | |
| CAI8043286.1 | REDOX-CYCLING DRUG-SENSING TRANSCRIPTIONAL ACTIVATOR SOXR |
| CAI8043287.1 | DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED |
| CAI8043288.1 | - |
| CAI8043289.1 | PEPTIDASE S9 PROLYL OLIGOPEPTIDASE |
| CAI8043290.1 | |
| CAI8043291.1 | |
| CAI8043292.1 | PAREP8-RELATED |
| CAI8043293.1 | |
| CAI8043294.1 | |
| CAI8043295.1 | CONTACTIN 5 |
| CAI8043296.1 | PROTEIN SIDEKICK |
| CAI8043297.1 | |
| CAI8043298.1 | |
| CAI8043299.1 | |
| CAI8043300.1 | EPH RECEPTOR A5 |
| CAI8043302.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8043301.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8043303.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8043304.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8043305.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8043306.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8043307.1 | SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN |
| CAI8043308.1 | |
| CAI8043309.1 | |
| CAI8043311.1 | ENHANCER OF RUDIMENTARY ERH |
| CAI8043310.1 | ENHANCER OF RUDIMENTARY ERH |
| CAI8043312.1 | |
| CAI8043313.1 | UPF0705 PROTEIN C11ORF49 |
| CAI8043314.1 | UNCHARACTERIZED |
| CAI8043315.1 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| CAI8043318.1 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| CAI8043319.1 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| CAI8043316.1 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| CAI8043317.1 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
| CAI8043320.1 |
