Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8043121.1 | |
| CAI8043123.1 | ETS |
| CAI8043122.1 | |
| CAI8043124.1 | ETS |
| CAI8043125.1 | ETS |
| CAI8043126.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8043127.1 | DENN DOMAIN-CONTAINING |
| CAI8043130.1 | DENN DOMAIN-CONTAINING |
| CAI8043128.1 | |
| CAI8043129.1 | |
| CAI8043131.1 | |
| CAI8043132.1 | |
| CAI8043134.1 | GABA-B RECEPTOR |
| CAI8043133.1 | GABA-B RECEPTOR |
| CAI8043135.1 | GABA-B RECEPTOR |
| CAI8043136.1 | GABA-B RECEPTOR |
| CAI8043137.1 | |
| CAI8043138.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8043139.1 | GABA-B RECEPTOR |
| CAI8043140.1 | |
| CAI8043141.1 | GABA-B RECEPTOR |
| CAI8043142.1 | GABA-B RECEPTOR |
| CAI8043143.1 | GABA-B RECEPTOR |
| CAI8043144.1 | GABA-B RECEPTOR |
| CAI8043146.1 | |
| CAI8043145.1 | |
| CAI8043147.1 | |
| CAI8043148.1 | |
| CAI8043149.1 | |
| CAI8043150.1 | |
| CAI8043151.1 | |
| CAI8043152.1 | |
| CAI8043153.1 | |
| CAI8043154.1 | |
| CAI8043155.1 | |
| CAI8043158.1 | |
| CAI8043157.1 | |
| CAI8043159.1 | |
| CAI8043156.1 | |
| CAI8043163.1 | |
| CAI8043161.1 | |
| CAI8043162.1 | |
| CAI8043164.1 | |
| CAI8043160.1 | |
| CAI8043165.1 | |
| CAI8043166.1 | |
| CAI8043167.1 | PROTEIN SIDEKICK |
| CAI8043169.1 | PROTEIN SIDEKICK |
| CAI8043168.1 | TENASCIN |
| CAI8043170.1 |
