Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8042621.1 | IMPORTIN ALPHA |
| CAI8042622.1 | |
| CAI8042623.1 | RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 |
| CAI8042624.1 | |
| CAI8042625.1 | AFADIN |
| CAI8042626.1 | |
| CAI8042629.1 | |
| CAI8042628.1 | |
| CAI8042627.1 | |
| CAI8042630.1 | |
| CAI8042631.1 | |
| CAI8042632.1 | |
| CAI8042633.1 | |
| CAI8042634.1 | |
| CAI8042635.1 | |
| CAI8042636.1 | |
| CAI8042639.1 | |
| CAI8042638.1 | |
| CAI8042637.1 | |
| CAI8042640.1 | EPHRIN |
| CAI8042644.1 | |
| CAI8042643.1 | |
| CAI8042642.1 | |
| CAI8042641.1 | |
| CAI8042645.1 | |
| CAI8042646.1 | |
| CAI8042650.1 | RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS |
| CAI8042649.1 | |
| CAI8042648.1 | |
| CAI8042647.1 | |
| CAI8042651.1 | RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS |
| CAI8042652.1 | |
| CAI8042653.1 | STERILE20-LIKE KINASE, ISOFORM B-RELATED |
| CAI8042654.1 | UNCHARACTERIZED |
| CAI8042655.1 | UNCHARACTERIZED |
| CAI8042656.1 | BROMO ADJACENT HOMOLOGY DOMAIN-CONTAINING 1 PROTEIN |
| CAI8042658.1 | BROMO ADJACENT HOMOLOGY DOMAIN-CONTAINING 1 PROTEIN |
| CAI8042657.1 | BROMO ADJACENT HOMOLOGY DOMAIN-CONTAINING 1 PROTEIN |
| CAI8042659.1 | BROMO ADJACENT HOMOLOGY DOMAIN-CONTAINING 1 PROTEIN |
| CAI8042660.1 | |
| CAI8042661.1 | |
| CAI8042663.1 | PROTEIN ARGININE N-METHYLTRANSFERASE 5 |
| CAI8042662.1 | PROTEIN ARGININE N-METHYLTRANSFERASE 5 |
| CAI8042664.1 | |
| CAI8042665.1 | PROTEIN ARGININE N-METHYLTRANSFERASE 5 |
| CAI8042666.1 | REGULATOR OF SIGMA-E PROTEASE RSEP |
| CAI8042667.1 | |
| CAI8042668.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8042669.1 | ACETATE--COA LIGASE [ADP-FORMING] |
| CAI8042670.1 | ACETATE--COA LIGASE [ADP-FORMING] |
