Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8042321.1 | |
| CAI8042322.1 | SLR5058 PROTEIN |
| CAI8042323.1 | |
| CAI8042324.1 | |
| CAI8042325.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| CAI8042335.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8042334.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8042333.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8042332.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8042330.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8042331.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8042328.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8042329.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 31-RELATED |
| CAI8042327.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8042326.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8042336.1 | |
| CAI8042337.1 | |
| CAI8042338.1 | DULLARD PROTEIN PHOSPHATASE |
| CAI8042339.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 9 |
| CAI8042340.1 | ZINC FINGER PROTEIN |
| CAI8042341.1 | |
| CAI8042342.1 | ZINC FINGER PROTEIN |
| CAI8042343.1 | |
| CAI8042344.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| CAI8042345.1 | |
| CAI8042347.1 | CENTROSOMAL PROTEIN 2 |
| CAI8042346.1 | |
| CAI8042348.1 | NEURALIZED |
| CAI8042349.1 | |
| CAI8042350.1 | |
| CAI8042352.1 | SEPIAPTERIN REDUCTASE |
| CAI8042351.1 | SEPIAPTERIN REDUCTASE |
| CAI8042353.1 | 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLTRANSFERASE |
| CAI8042354.1 | SPLICING FACTOR 3B |
| CAI8042355.1 | SPLICING FACTOR 3B |
| CAI8042356.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| CAI8042357.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| CAI8042358.1 | |
| CAI8042359.1 | |
| CAI8042360.1 | |
| CAI8042361.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| CAI8042364.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| CAI8042362.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| CAI8042363.1 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| CAI8042365.1 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| CAI8042366.1 | |
| CAI8042367.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8042368.1 | |
| CAI8042369.1 | |
| CAI8042370.1 |
