Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8042071.1 | |
| CAI8042078.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8042074.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8042077.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8042076.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8042075.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8042073.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8042072.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8042079.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8042080.1 | |
| CAI8042081.1 | PRESEQUENCE TRANSLOCATED-ASSOCIATED MOTOR SUBUNIT PAM17, MITOCHONDRIAL |
| CAI8042082.1 | PRESEQUENCE TRANSLOCATED-ASSOCIATED MOTOR SUBUNIT PAM17, MITOCHONDRIAL |
| CAI8042083.1 | |
| CAI8042084.1 | |
| CAI8042085.1 | |
| CAI8042086.1 | |
| CAI8042087.1 | |
| CAI8042089.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042088.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042094.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042093.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042092.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042091.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042090.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042095.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042098.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042097.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042096.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042099.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042100.1 | DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED |
| CAI8042106.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| CAI8042105.1 | PROTEIN BNI1 |
| CAI8042103.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| CAI8042104.1 | |
| CAI8042102.1 | |
| CAI8042101.1 | |
| CAI8042107.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| CAI8042108.1 | GOLGI REASSEMBLY STACKING PROTEIN GRASP |
| CAI8042109.1 | GOLGI REASSEMBLY STACKING PROTEIN GRASP |
| CAI8042110.1 | RWD DOMAIN CONTAINING PROTEIN 2 |
| CAI8042111.1 | |
| CAI8042113.1 | HL07962P-RELATED |
| CAI8042112.1 | NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED |
| CAI8042114.1 | HL07962P-RELATED |
| CAI8042115.1 | HL07962P-RELATED |
| CAI8042116.1 | - |
| CAI8042118.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042117.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042119.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042120.1 |
