Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8042521.1 | HELICASE SRCAP-RELATED |
| CAI8042523.1 | HELICASE SRCAP-RELATED |
| CAI8042522.1 | |
| CAI8042524.1 | HELICASE SRCAP-RELATED |
| CAI8042525.1 | |
| CAI8042526.1 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S10 |
| CAI8042527.1 | NUCLEOBINDIN |
| CAI8042528.1 | |
| CAI8042530.1 | |
| CAI8042529.1 | |
| CAI8042531.1 | UNCHARACTERIZED |
| CAI8042532.1 | SEL-1-LIKE PROTEIN |
| CAI8042534.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042533.1 | LIM DOMAIN ONLY PROTEIN 7 |
| CAI8042536.1 | LIM DOMAIN ONLY PROTEIN 7 |
| CAI8042535.1 | LIM DOMAIN ONLY PROTEIN 7 |
| CAI8042537.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042538.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042539.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042540.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042541.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042542.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042543.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042544.1 | MEMBRANE-ASSOCIATED GUANYLATE KINASE MAGUK |
| CAI8042546.1 | |
| CAI8042545.1 | |
| CAI8042547.1 | |
| CAI8042548.1 | |
| CAI8042549.1 | |
| CAI8042551.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8042550.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8042553.1 | |
| CAI8042552.1 | |
| CAI8042554.1 | |
| CAI8042555.1 | |
| CAI8042556.1 | TENASCIN |
| CAI8042557.1 | CYTOKINE RECEPTOR |
| CAI8042558.1 | CYTOKINE RECEPTOR |
| CAI8042562.1 | 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER |
| CAI8042561.1 | 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER |
| CAI8042560.1 | 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER |
| CAI8042559.1 | 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER |
| CAI8042563.1 | V-TYPE ATP SYNTHASE SUBUNIT D |
| CAI8042564.1 | V-TYPE ATP SYNTHASE SUBUNIT D |
| CAI8042565.1 | V-TYPE ATP SYNTHASE SUBUNIT D |
| CAI8042568.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8042567.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8042569.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8042566.1 | |
| CAI8042570.1 | KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 13-RELATED |
