Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8042574.1 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATED |
| CAI8042573.1 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATED |
| CAI8042572.1 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATED |
| CAI8042571.1 | |
| CAI8042575.1 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATED |
| CAI8042580.1 | RIBOSOME BIOGENESIS PROTEIN |
| CAI8042581.1 | RIBOSOME BIOGENESIS PROTEIN |
| CAI8042579.1 | RIBOSOME BIOGENESIS PROTEIN |
| CAI8042577.1 | RIBOSOME BIOGENESIS PROTEIN |
| CAI8042576.1 | RIBOSOME BIOGENESIS PROTEIN |
| CAI8042578.1 | RIBOSOME BIOGENESIS PROTEIN |
| CAI8042583.1 | RIBOSOME BIOGENESIS PROTEIN |
| CAI8042582.1 | RIBOSOME BIOGENESIS PROTEIN |
| CAI8042584.1 | |
| CAI8042585.1 | RIBOSOME BIOGENESIS PROTEIN |
| CAI8042586.1 | DEP DOMAIN-CONTAINING |
| CAI8042587.1 | LEUCINE RICH REPEAT KINASE 2 |
| CAI8042588.1 | |
| CAI8042589.1 | TRANSMEMBRANE PROTEIN 234 |
| CAI8042590.1 | LD44762P |
| CAI8042591.1 | |
| CAI8042592.1 | |
| CAI8042594.1 | VACUOLAR PROTEIN SORTING 54 |
| CAI8042595.1 | VACUOLAR PROTEIN SORTING 54 |
| CAI8042593.1 | |
| CAI8042596.1 | VACUOLAR PROTEIN SORTING 54 |
| CAI8042598.1 | VACUOLAR PROTEIN SORTING 54 |
| CAI8042597.1 | VACUOLAR PROTEIN SORTING 54 |
| CAI8042599.1 | |
| CAI8042600.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8042601.1 | |
| CAI8042602.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8042603.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8042604.1 | |
| CAI8042605.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8042606.1 | |
| CAI8042607.1 | |
| CAI8042608.1 | EPH RECEPTOR A5 |
| CAI8042609.1 | |
| CAI8042610.1 | |
| CAI8042611.1 | |
| CAI8042613.1 | |
| CAI8042612.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| CAI8042614.1 | CALPONIN |
| CAI8042615.1 | CALPONIN |
| CAI8042619.1 | IMPORTIN ALPHA |
| CAI8042618.1 | IMPORTIN ALPHA |
| CAI8042617.1 | IMPORTIN ALPHA |
| CAI8042616.1 | IMPORTIN ALPHA |
| CAI8042620.1 | IMPORTIN ALPHA |
