Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8041720.1 | PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE |
| CAI8041723.1 | PEPTIDYL-GLYCINE ALPHA-AMIDATING MONOOXYGENASE |
| CAI8041722.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8041724.1 | |
| CAI8041725.1 | |
| CAI8041726.1 | |
| CAI8041727.1 | |
| CAI8041728.1 | VACUOLAR PROTEIN SORTING 26 RELATED |
| CAI8041729.1 | VACUOLAR PROTEIN SORTING 26 RELATED |
| CAI8041730.1 | |
| CAI8041731.1 | BONUS, ISOFORM C-RELATED |
| CAI8041732.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8041739.1 | ALPHA-MANNOSIDASE |
| CAI8041737.1 | ALPHA-MANNOSIDASE |
| CAI8041738.1 | ALPHA-MANNOSIDASE |
| CAI8041736.1 | ALPHA-MANNOSIDASE |
| CAI8041734.1 | ALPHA-MANNOSIDASE |
| CAI8041733.1 | ALPHA-MANNOSIDASE |
| CAI8041735.1 | ALPHA-MANNOSIDASE |
| CAI8041740.1 | ALPHA-MANNOSIDASE |
| CAI8041746.1 | FIBRILLIN-RELATED |
| CAI8041744.1 | FIBRILLIN-RELATED |
| CAI8041743.1 | FIBRILLIN-RELATED |
| CAI8041742.1 | FIBRILLIN-RELATED |
| CAI8041745.1 | PA14 DOMAIN-CONTAINING PROTEIN |
| CAI8041749.1 | FIBRILLIN-RELATED |
| CAI8041748.1 | FIBRILLIN-RELATED |
| CAI8041750.1 | PA14 DOMAIN-CONTAINING PROTEIN |
| CAI8041747.1 | FIBRILLIN-RELATED |
| CAI8041741.1 | |
| CAI8041752.1 | FIBRILLIN-RELATED |
| CAI8041751.1 | FIBRILLIN-RELATED |
| CAI8041753.1 | |
| CAI8041754.1 | |
| CAI8041755.1 | |
| CAI8041757.1 | |
| CAI8041758.1 | |
| CAI8041756.1 | |
| CAI8041759.1 | |
| CAI8041760.1 | |
| CAI8041761.1 | |
| CAI8041765.1 | NEPHRIN |
| CAI8041763.1 | NEPHRIN |
| CAI8041764.1 | NEPHRIN |
| CAI8041762.1 | NEPHRIN |
| CAI8041766.1 | |
| CAI8041767.1 | |
| CAI8041768.1 | SPONDIN |
| CAI8041770.1 | |
| CAI8041769.1 |
