Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8041571.1 | K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP |
| CAI8041574.1 | SERINE HYDROXYMETHYLTRANSFERASE |
| CAI8041573.1 | SERINE HYDROXYMETHYLTRANSFERASE |
| CAI8041572.1 | SERINE HYDROXYMETHYLTRANSFERASE |
| CAI8041575.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 6 |
| CAI8041576.1 | |
| CAI8041577.1 | |
| CAI8041578.1 | INOSINE-5-MONOPHOSPHATE DEHYDROGENASE RELATED |
| CAI8041579.1 | NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL |
| CAI8041580.1 | NADH DEHYDROGENASE UBIQUINONE IRON-SULFUR PROTEIN 8, MITOCHONDRIAL |
| CAI8041581.1 | |
| CAI8041582.1 | ALDEHYDE OXIDOREDUCTASE MOLYBDENUM COFACTOR ASSEMBLY PROTEIN |
| CAI8041583.1 | |
| CAI8041584.1 | CBP/P300-RELATED |
| CAI8041585.1 | INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN |
| CAI8041586.1 | INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN |
| CAI8041588.1 | - |
| CAI8041587.1 | - |
| CAI8041589.1 | QUINONE OXIDOREDUCTASE PIG3-RELATED |
| CAI8041590.1 | |
| CAI8041591.1 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
| CAI8041602.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041601.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041600.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041599.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041598.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041597.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041596.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041595.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041593.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041594.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041592.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041604.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041603.1 | FUCOSE-1-PHOSPHATE GUANYLYLTRANSFERASE |
| CAI8041605.1 | |
| CAI8041606.1 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| CAI8041607.1 | |
| CAI8041608.1 | |
| CAI8041609.1 | |
| CAI8041610.1 | |
| CAI8041611.1 | ADENOSINE DEAMINASE |
| CAI8041613.1 | GRB2-ASSOCIATED-BINDING PROTEIN |
| CAI8041612.1 | GRB2-ASSOCIATED-BINDING PROTEIN |
| CAI8041614.1 | GRB2-ASSOCIATED-BINDING PROTEIN |
| CAI8041615.1 | |
| CAI8041617.1 | PROTEIN SIDEKICK |
| CAI8041616.1 | PROTEIN SIDEKICK |
| CAI8041619.1 | PROTEIN SIDEKICK |
| CAI8041620.1 | PROTEIN SIDEKICK |
| CAI8041618.1 | PROTEIN SIDEKICK |
