Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8041373.1 | NULP1-RELATED |
| CAI8041372.1 | NULP1-RELATED |
| CAI8041370.1 | NULP1-RELATED |
| CAI8041371.1 | NULP1-RELATED |
| CAI8041369.1 | NULP1-RELATED |
| CAI8041368.1 | NULP1-RELATED |
| CAI8041367.1 | NULP1-RELATED |
| CAI8041366.1 | NULP1-RELATED |
| CAI8041379.1 | |
| CAI8041380.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8041381.1 | |
| CAI8041382.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8041383.1 | NUCLEOPORIN AMO1-LIKE |
| CAI8041384.1 | |
| CAI8041385.1 | NULP1-RELATED |
| CAI8041387.1 | NULP1-RELATED |
| CAI8041386.1 | NULP1-RELATED |
| CAI8041388.1 | |
| CAI8041389.1 | |
| CAI8041390.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8041391.1 | |
| CAI8041392.1 | |
| CAI8041393.1 | |
| CAI8041394.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8041396.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8041395.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8041397.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8041398.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8041399.1 | CARBAMOYLTRANSFERASE FAMILY MEMBER |
| CAI8041400.1 | |
| CAI8041401.1 | SIROHEME SYNTHASE-RELATED |
| CAI8041402.1 | COBALT-PRECORRIN-2 C(20)-METHYLTRANSFERASE |
| CAI8041403.1 | COBALT-PRECORRIN-6B C(15)-METHYLTRANSFERASE (DECARBOXYLATING) |
| CAI8041404.1 | COBALT-PRECORRIN-5B C(1)-METHYLTRANSFERASE |
| CAI8041405.1 | SIROHYDROCHLORIN FERROCHELATASE, CHLOROPLASTIC |
| CAI8041406.1 | COBALT-PRECORRIN-8 METHYLMUTASE |
| CAI8041407.1 | LEUCYL-TRNA SYNTHETASE |
| CAI8041408.1 | LEUCYL-TRNA SYNTHETASE |
| CAI8041409.1 | POTASSIUM CHANNEL PROTEIN 2-RELATED-RELATED |
| CAI8041410.1 | PREPHENATE DEHYDRATASE P PROTEIN |
| CAI8041411.1 | |
| CAI8041412.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041413.1 | |
| CAI8041414.1 | |
| CAI8041417.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8041415.1 | |
| CAI8041416.1 | |
| CAI8041418.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| CAI8041419.1 | CASEIN KINASE-RELATED |
| CAI8041420.1 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
