Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8041171.1 | PBS LYASE HEAT-LIKE PROTEIN |
| CAI8041172.1 | - |
| CAI8041173.1 | SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA |
| CAI8041174.1 | TPR REPEAT-CONTAINING PROTEIN PA4667 |
| CAI8041175.1 | CARTILAGE ACIDIC PROTEIN 1 |
| CAI8041176.1 | |
| CAI8041177.1 | METHYLTRANSFERASE |
| CAI8041178.1 | OXIDOREDUCTASE-RELATED |
| CAI8041179.1 | THIOREDOXIN REDUCTASE 1-RELATED-RELATED |
| CAI8041180.1 | SUGAR KINASE |
| CAI8041181.1 | MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A |
| CAI8041182.1 | |
| CAI8041183.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041184.1 | |
| CAI8041186.1 | NUCLEOTIDE KINASE |
| CAI8041187.1 | NUCLEOTIDE KINASE |
| CAI8041185.1 | NUCLEOTIDE KINASE |
| CAI8041188.1 | ASTEROID PROTEIN |
| CAI8041189.1 | SPRY DOMAIN CONTAINING SOCS BOX PROTEIN |
| CAI8041191.1 | GATOR COMPLEX PROTEIN WDR24 |
| CAI8041190.1 | GATOR COMPLEX PROTEIN WDR24 |
| CAI8041192.1 | GATOR COMPLEX PROTEIN WDR24 |
| CAI8041193.1 | GATOR COMPLEX PROTEIN WDR24 |
| CAI8041194.1 | |
| CAI8041195.1 | |
| CAI8041196.1 | GATOR COMPLEX PROTEIN WDR24 |
| CAI8041197.1 | |
| CAI8041198.1 | |
| CAI8041199.1 | TRANSPORTER ARSB-RELATED |
| CAI8041200.1 | |
| CAI8041201.1 | |
| CAI8041202.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8041203.1 | |
| CAI8041204.1 | |
| CAI8041205.1 | |
| CAI8041206.1 | |
| CAI8041207.1 | |
| CAI8041208.1 | |
| CAI8041209.1 | |
| CAI8041210.1 | TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER |
| CAI8041211.1 | |
| CAI8041214.1 | |
| CAI8041215.1 | |
| CAI8041212.1 | |
| CAI8041213.1 | CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 |
| CAI8041216.1 | NNMT/PNMT/TEMT FAMILY MEMBER |
| CAI8041220.1 | PROTEIN SIDEKICK |
| CAI8041219.1 | PROTEIN SIDEKICK |
| CAI8041218.1 | PROTEIN SIDEKICK |
| CAI8041217.1 | PROTEIN SIDEKICK |
