Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8040971.1 | SPARC OSTEONECTIN |
| CAI8040976.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| CAI8040975.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| CAI8040974.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| CAI8040973.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| CAI8040972.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| CAI8040977.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| CAI8040978.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| CAI8040979.1 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| CAI8040980.1 | |
| CAI8040981.1 | |
| CAI8040982.1 | PROBABLE MEMBRANE PROTEIN DUF221-RELATED |
| CAI8040983.1 | |
| CAI8040984.1 | |
| CAI8040985.1 | |
| CAI8040986.1 | |
| CAI8040987.1 | |
| CAI8040989.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8040990.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8040988.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8040991.1 | NG5 |
| CAI8040992.1 | NG5 |
| CAI8040994.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8040993.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8040995.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8040996.1 | SH2-SH3 ADAPTOR PROTEIN-RELATED |
| CAI8040997.1 | |
| CAI8040998.1 | |
| CAI8040999.1 | |
| CAI8041001.1 | BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1 |
| CAI8041000.1 | |
| CAI8041002.1 | ROLLING PEBBLES, ISOFORM B |
| CAI8041003.1 | |
| CAI8041004.1 | |
| CAI8041005.1 | |
| CAI8041006.1 | RIBOSOME MATURATION PROTEIN SBDS |
| CAI8041011.1 | |
| CAI8041012.1 | UBIQUITIN-ACTIVATING ENZYME E1 |
| CAI8041010.1 | UBIQUITIN-ACTIVATING ENZYME E1 |
| CAI8041009.1 | UBIQUITIN-ACTIVATING ENZYME E1 |
| CAI8041008.1 | UBIQUITIN-ACTIVATING ENZYME E1 |
| CAI8041007.1 | UBIQUITIN-ACTIVATING ENZYME E1 |
| CAI8041013.1 | UBIQUITIN-ACTIVATING ENZYME E1 |
| CAI8041014.1 | |
| CAI8041015.1 | |
| CAI8041020.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8041019.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8041018.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8041017.1 | |
| CAI8041016.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
