Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8041671.1 | |
| CAI8041672.1 | |
| CAI8041673.1 | |
| CAI8041674.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041677.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041678.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041676.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041675.1 | |
| CAI8041679.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041680.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041681.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041684.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041683.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041682.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041687.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041686.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041685.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041688.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041690.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041689.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041691.1 | |
| CAI8041692.1 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| CAI8041693.1 | |
| CAI8041699.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041701.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041700.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041698.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041697.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041696.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041695.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041694.1 | |
| CAI8041702.1 | |
| CAI8041703.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041704.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041706.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041705.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8041707.1 | |
| CAI8041708.1 | DEP DOMAIN PROTEIN |
| CAI8041709.1 | |
| CAI8041710.1 | |
| CAI8041711.1 | |
| CAI8041712.1 | |
| CAI8041713.1 | |
| CAI8041714.1 | |
| CAI8041716.1 | LIM/HOMEOBOX PROTEIN LHX |
| CAI8041715.1 | LIM/HOMEOBOX PROTEIN LHX |
| CAI8041717.1 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
| CAI8041718.1 | WD40 PROTEIN CIAO1 |
| CAI8041719.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| CAI8041721.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
