About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_004654-T1
OS493_004655-T1
OS493_004656-T1
OS493_004657-T1
OS493_004658-T1
OS493_004660-T1
OS493_004662-T1
OS493_004663-T1
OS493_004664-T1
OS493_004665-T1IKB KINASE
OS493_004666-T1IKB KINASE
OS493_004667-T1FAM13
OS493_004668-T1BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE
OS493_004669-T1
OS493_004670-T1
OS493_004671-T1COLLAGEN ALPHA
OS493_004672-T1COLLAGEN ALPHA
OS493_004673-T1COLLAGEN ALPHA
OS493_004674-T1COLLAGEN ALPHA
OS493_004675-T1SECRETED MODULAR CALCIUM-BINDING PROTEIN
OS493_004676-T1UNCHARACTERIZED
OS493_004677-T1SECRETED MODULAR CALCIUM-BINDING PROTEIN
OS493_004678-T1SECRETED MODULAR CALCIUM-BINDING PROTEIN
OS493_004679-T1SECRETED MODULAR CALCIUM-BINDING PROTEIN
OS493_004680-T1
OS493_004681-T1
OS493_004682-T1UNCHARACTERIZED
OS493_004683-T1
OS493_004684-T1UNCHARACTERIZED
OS493_004685-T1SECRETED MODULAR CALCIUM-BINDING PROTEIN
OS493_004686-T1
OS493_004687-T1SECRETED MODULAR CALCIUM-BINDING PROTEIN
OS493_004688-T1SECRETED MODULAR CALCIUM-BINDING PROTEIN
OS493_004689-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_004690-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_004691-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_004692-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_004693-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_004694-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_004695-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_004696-T1
OS493_004697-T1OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR
OS493_004698-T1CADHERIN-23
OS493_004699-T1FAT ATYPICAL CADHERIN-RELATED
OS493_004700-T1
OS493_004701-T1NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1
OS493_004702-T1OPSIN
OS493_004703-T1
OS493_004704-T1REGULATOR COMPLEX PROTEIN LAMTOR3
OS493_004705-T1TUDOR DOMAIN CONTAINING PROTEIN
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