About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_004441-T1
OS493_004442-T1T-BOX PROTEIN-RELATED
OS493_004443-T1ORGANIC ANION TRANSPORTER
OS493_004444-T1ORGANIC ANION TRANSPORTER
OS493_004445-T1ENDOPLASMIC RETICULUM PROTEIN ERP29
OS493_004446-T1
OS493_004447-T1
OS493_004448-T1
OS493_004449-T1GUANYLATE BINDING PROTEIN
OS493_004450-T1GUANYLATE BINDING PROTEIN
OS493_004451-T1GUANYLATE BINDING PROTEIN
OS493_004452-T1GUANYLATE BINDING PROTEIN
OS493_004453-T1GUANYLATE BINDING PROTEIN
OS493_004454-T1
OS493_004455-T1
OS493_004456-T1GUANYLATE BINDING PROTEIN
OS493_004457-T1
OS493_004458-T1
OS493_004459-T1
OS493_004460-T1
OS493_004461-T1GUANYLATE BINDING PROTEIN
OS493_004462-T1GUANYLATE BINDING PROTEIN
OS493_004463-T1GUANYLATE BINDING PROTEIN
OS493_004464-T1
OS493_004465-T1GUANYLATE BINDING PROTEIN
OS493_004466-T1GUANYLATE BINDING PROTEIN
OS493_004467-T1GUANYLATE BINDING PROTEIN
OS493_004468-T1
OS493_004469-T1
OS493_004470-T1
OS493_004471-T1
OS493_004472-T1GUANYLATE BINDING PROTEIN
OS493_004473-T1
OS493_004474-T1
OS493_004475-T1IONOTROPIC GLUTAMATE RECEPTOR
OS493_004476-T1RAB GDP-DISSOCIATION INHIBITOR
OS493_004477-T1GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING
OS493_004478-T1TETRASPANIN
OS493_004479-T1SARCOMA ANTIGEN NY-SAR-23
OS493_004480-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
OS493_004481-T1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
OS493_004482-T1DNAJ HOMOLOG SUBFAMILY C MEMBER 25
OS493_004483-T1GUANYLATE BINDING PROTEIN
OS493_004484-T1
OS493_004485-T1
OS493_004486-T1
OS493_004487-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
OS493_004488-T1
OS493_004490-T1IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
OS493_004491-T1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
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