Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8040620.1 | |
| CAI8040623.1 | |
| CAI8040622.1 | |
| CAI8040624.1 | |
| CAI8040625.1 | |
| CAI8040629.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040628.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040627.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040626.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040631.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040632.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040630.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040633.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040634.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040635.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040636.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040637.1 | RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF |
| CAI8040638.1 | |
| CAI8040639.1 | CADHERIN-23 |
| CAI8040640.1 | DESMOGLEIN FAMILY MEMBER |
| CAI8040641.1 | DESMOGLEIN FAMILY MEMBER |
| CAI8040642.1 | |
| CAI8040643.1 | |
| CAI8040644.1 | |
| CAI8040645.1 | |
| CAI8040646.1 | |
| CAI8040647.1 | |
| CAI8040653.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| CAI8040654.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| CAI8040655.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| CAI8040657.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| CAI8040656.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| CAI8040652.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| CAI8040651.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| CAI8040650.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| CAI8040658.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| CAI8040659.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| CAI8040649.1 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
| CAI8040648.1 | RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR |
| CAI8040661.1 | TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER |
| CAI8040660.1 | TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER |
| CAI8040662.1 | TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER |
| CAI8040663.1 | TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER |
| CAI8040664.1 | TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER |
| CAI8040667.1 | |
| CAI8040666.1 | |
| CAI8040665.1 | |
| CAI8040673.1 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
| CAI8040672.1 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
| CAI8040670.1 | WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED |
