Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8040420.1 | D-GALACTONATE DEHYDRATASE-RELATED |
| CAI8040421.1 | D-GALACTONATE DEHYDRATASE-RELATED |
| CAI8040423.1 | D-GALACTONATE DEHYDRATASE-RELATED |
| CAI8040424.1 | D-GALACTONATE DEHYDRATASE-RELATED |
| CAI8040425.1 | D-GALACTONATE DEHYDRATASE-RELATED |
| CAI8040427.1 | D-GALACTONATE DEHYDRATASE-RELATED |
| CAI8040426.1 | D-GALACTONATE DEHYDRATASE-RELATED |
| CAI8040428.1 | OS01G0149700 PROTEIN |
| CAI8040429.1 | D-GALACTONATE DEHYDRATASE-RELATED |
| CAI8040430.1 | 2-KETO-3-DEOXY-L-RHAMNONATE ALDOLASE |
| CAI8040431.1 | |
| CAI8040432.1 | |
| CAI8040433.1 | TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE |
| CAI8040434.1 | TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE |
| CAI8040436.1 | WD40 REPEAT PROTEIN |
| CAI8040435.1 | WD40 REPEAT PROTEIN |
| CAI8040439.1 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| CAI8040440.1 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| CAI8040441.1 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| CAI8040442.1 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| CAI8040443.1 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| CAI8040438.1 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| CAI8040437.1 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| CAI8040444.1 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| CAI8040445.1 | PHOSPHORYLASE B KINASE REGULATORY SUBUNIT |
| CAI8040446.1 | |
| CAI8040447.1 | |
| CAI8040448.1 | NEUROCHONDRIN |
| CAI8040449.1 | BAX INHIBITOR-RELATED |
| CAI8040451.1 | BAX INHIBITOR-RELATED |
| CAI8040450.1 | BAX INHIBITOR-RELATED |
| CAI8040454.1 | BARDET-BIEDL SYNDROME 7 PROTEIN |
| CAI8040455.1 | BARDET-BIEDL SYNDROME 7 PROTEIN |
| CAI8040456.1 | BARDET-BIEDL SYNDROME 7 PROTEIN |
| CAI8040453.1 | BARDET-BIEDL SYNDROME 7 PROTEIN |
| CAI8040452.1 | BARDET-BIEDL SYNDROME 7 PROTEIN |
| CAI8040457.1 | BARDET-BIEDL SYNDROME 7 PROTEIN |
| CAI8040459.1 | EXPRESSED PROTEIN |
| CAI8040458.1 | EXPRESSED PROTEIN |
| CAI8040460.1 | OVARIAN CARCINOMA IMMUNOREACTIVE ANTIGEN |
| CAI8040463.1 | AGAP001623-PA |
| CAI8040464.1 | AGAP001623-PA |
| CAI8040462.1 | AGAP001623-PA |
| CAI8040461.1 | |
| CAI8040465.1 | |
| CAI8040466.1 | AGAP001623-PA |
| CAI8040467.1 | SNF2/RAD54 HELICASE FAMILY |
| CAI8040469.1 | SNF2/RAD54 HELICASE FAMILY |
| CAI8040468.1 | SNF2/RAD54 HELICASE FAMILY |
| CAI8040470.1 |
