Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8040077.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| CAI8040078.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| CAI8040079.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| CAI8040076.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| CAI8040075.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| CAI8040074.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| CAI8040073.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| CAI8040072.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| CAI8040071.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| CAI8040080.1 | PHOSPHATIDYLINOSITIDE PHOSPHATASE SAC1 |
| CAI8040081.1 | |
| CAI8040082.1 | |
| CAI8040083.1 | |
| CAI8040084.1 | |
| CAI8040086.1 | |
| CAI8040085.1 | |
| CAI8040087.1 | |
| CAI8040088.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| CAI8040089.1 | |
| CAI8040090.1 | |
| CAI8040092.1 | |
| CAI8040091.1 | |
| CAI8040093.1 | |
| CAI8040095.1 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14 |
| CAI8040094.1 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14 |
| CAI8040096.1 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14 |
| CAI8040097.1 | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14 |
| CAI8040098.1 | |
| CAI8040099.1 | |
| CAI8040100.1 | |
| CAI8040101.1 | |
| CAI8040102.1 | |
| CAI8040106.1 | |
| CAI8040105.1 | |
| CAI8040104.1 | |
| CAI8040103.1 | |
| CAI8040108.1 | |
| CAI8040107.1 | |
| CAI8040110.1 | |
| CAI8040109.1 | |
| CAI8040112.1 | |
| CAI8040111.1 | |
| CAI8040113.1 | |
| CAI8040117.1 | CYSTATHIONINE BETA-SYNTHASE |
| CAI8040116.1 | CYSTATHIONINE BETA-SYNTHASE |
| CAI8040114.1 | CYSTATHIONINE BETA-SYNTHASE |
| CAI8040115.1 | CYSTATHIONINE BETA-SYNTHASE |
| CAI8040118.1 | UNCHARACTERIZED |
| CAI8040119.1 | |
| CAI8040120.1 | SRCR DOMAIN-CONTAINING PROTEIN |
