Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8039717.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8039722.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8039723.1 | |
| CAI8039724.1 | |
| CAI8039727.1 | |
| CAI8039726.1 | |
| CAI8039725.1 | |
| CAI8039728.1 | |
| CAI8039729.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8039730.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8039731.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8039732.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8039734.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8039733.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8039735.1 | DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC |
| CAI8039736.1 | DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC |
| CAI8039737.1 | DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC |
| CAI8039738.1 | RADICAL SAM PROTEINS |
| CAI8039739.1 | SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA |
| CAI8039740.1 | NUDIX HYDROLASE 23 |
| CAI8039741.1 | PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTER |
| CAI8039742.1 | INNER MEMBRANE ABC TRANSPORTER |
| CAI8039743.1 | MEMBRANE COMPONENT OF ABC TRANSPORTER |
| CAI8039744.1 | TRANSPORT ATP-BINDING PROTEIN |
| CAI8039745.1 | ACETYLORNITHINE DEACETYLASE |
| CAI8039747.1 | MOLYBDENUM COFACTOR GUANYLYLTRANSFERASE |
| CAI8039746.1 | MOLYBDENUM COFACTOR GUANYLYLTRANSFERASE |
| CAI8039748.1 | SERINE PROTEASE FAMILY S1C HTRA-RELATED |
| CAI8039749.1 | REGULATOR OF RPOS |
| CAI8039750.1 | RIBONUCLEASE VAPC2 |
| CAI8039751.1 | |
| CAI8039755.1 | UREASE |
| CAI8039754.1 | UREASE |
| CAI8039753.1 | UREASE |
| CAI8039752.1 | UREASE |
| CAI8039756.1 | |
| CAI8039757.1 | UREASE |
| CAI8039758.1 | PROSTAGLANDIN REDUCTASE |
| CAI8039759.1 | |
| CAI8039760.1 | MALTOSE TRANSPORT SYSTEM PERMEASE-RELATED |
| CAI8039761.1 | MALTODEXTRIN IMPORT ATP-BINDING PROTEIN MSMX |
| CAI8039762.1 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE |
| CAI8039763.1 | |
| CAI8039766.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8039764.1 | |
| CAI8039765.1 | |
| CAI8039767.1 | |
| CAI8039768.1 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| CAI8039769.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| CAI8039772.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
