Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8039472.1 | UNCHARACTERIZED |
| CAI8039471.1 | |
| CAI8039470.1 | UNCHARACTERIZED |
| CAI8039475.1 | MYOSIN |
| CAI8039476.1 | MYOSIN |
| CAI8039474.1 | MYOSIN |
| CAI8039478.1 | MYOSIN |
| CAI8039477.1 | AGAP011099-PA |
| CAI8039479.1 | MYOSIN |
| CAI8039480.1 | MYOSIN |
| CAI8039481.1 | MYOSIN |
| CAI8039482.1 | MYOSIN |
| CAI8039483.1 | |
| CAI8039485.1 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 |
| CAI8039484.1 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 |
| CAI8039487.1 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 |
| CAI8039486.1 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 |
| CAI8039488.1 | FORKHEAD BOX PROTEIN |
| CAI8039489.1 | |
| CAI8039490.1 | SEPTIN |
| CAI8039491.1 | SORTING NEXIN |
| CAI8039492.1 | L-SERYL-TRNA(SEC) SELENIUM TRANSFERASE |
| CAI8039493.1 | L-SERYL-TRNA(SEC) SELENIUM TRANSFERASE |
| CAI8039494.1 | SULFATASE MODIFYING FACTOR 1, 2 |
| CAI8039495.1 | SPERMIDINE/PUTRESCINE IMPORT ATP-BINDING PROTEIN POTA |
| CAI8039496.1 | UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER |
| CAI8039497.1 | BCDNA.GH03377 |
| CAI8039498.1 | CARTILAGE ACIDIC PROTEIN 1 |
| CAI8039499.1 | |
| CAI8039500.1 | CONSERVED EXPRESSED OXIDOREDUCTASE (EUROFUNG) |
| CAI8039501.1 | |
| CAI8039502.1 | D-GALACTONATE DEHYDRATASE-RELATED |
| CAI8039503.1 | AMINOTRANSFERASE CLASS III |
| CAI8039505.1 | AMINOTRANSFERASE CLASS III |
| CAI8039504.1 | AMINOTRANSFERASE CLASS III |
| CAI8039506.1 | AMINOTRANSFERASE CLASS III |
| CAI8039507.1 | AMINOTRANSFERASE CLASS III |
| CAI8039508.1 | |
| CAI8039509.1 | RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN |
| CAI8039510.1 | |
| CAI8039511.1 | PEPTIDYL-TRNA HYDROLASE |
| CAI8039512.1 | PHOSPHATASE |
| CAI8039513.1 | THIAMINE PYROPHOSPHATE ENZYMES |
| CAI8039514.1 | PHYTANOYL-COA DIOXYGENASE DOMAIN CONTAINING 1 |
| CAI8039515.1 | BCDNA.GH03377 |
| CAI8039516.1 | |
| CAI8039517.1 | |
| CAI8039518.1 | |
| CAI8039519.1 | |
| CAI8039520.1 |
