Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8039020.1 | PRESEQUENCE PROTEASE |
| CAI8039019.1 | |
| CAI8039023.1 | PRESEQUENCE PROTEASE |
| CAI8039024.1 | PRESEQUENCE PROTEASE |
| CAI8039025.1 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20-RELATED |
| CAI8039026.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 77 |
| CAI8039027.1 | GLYCOSYL TRANSFERASE-RELATED |
| CAI8039028.1 | GLYCOSYL TRANSFERASE-RELATED |
| CAI8039029.1 | UNCHARACTERIZED |
| CAI8039030.1 | UNCHARACTERIZED |
| CAI8039035.1 | TUDOR DOMAIN CONTAINING PROTEIN |
| CAI8039034.1 | TUDOR DOMAIN CONTAINING PROTEIN |
| CAI8039033.1 | TUDOR DOMAIN CONTAINING PROTEIN |
| CAI8039032.1 | TUDOR DOMAIN CONTAINING PROTEIN |
| CAI8039031.1 | OS02G0815200 PROTEIN |
| CAI8039036.1 | INWARD RECTIFIER POTASSIUM CHANNEL |
| CAI8039041.1 | CYTOSINE-SPECIFIC METHYLTRANSFERASE |
| CAI8039042.1 | CYTOSINE-SPECIFIC METHYLTRANSFERASE |
| CAI8039040.1 | CYTOSINE-SPECIFIC METHYLTRANSFERASE |
| CAI8039039.1 | CYTOSINE-SPECIFIC METHYLTRANSFERASE |
| CAI8039038.1 | CYTOSINE-SPECIFIC METHYLTRANSFERASE |
| CAI8039037.1 | CYTOSINE-SPECIFIC METHYLTRANSFERASE |
| CAI8039043.1 | CYTOSINE-SPECIFIC METHYLTRANSFERASE |
| CAI8039044.1 | CYTOSINE-SPECIFIC METHYLTRANSFERASE |
| CAI8039045.1 | |
| CAI8039047.1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| CAI8039048.1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| CAI8039046.1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| CAI8039049.1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
| CAI8039051.1 | TRANSMEMBRANE CHANNEL-RELATED |
| CAI8039050.1 | TRANSMEMBRANE CHANNEL-RELATED |
| CAI8039052.1 | TRANSMEMBRANE CHANNEL-RELATED |
| CAI8039058.1 | LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED |
| CAI8039054.1 | LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED |
| CAI8039056.1 | LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED |
| CAI8039055.1 | LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED |
| CAI8039057.1 | LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED |
| CAI8039053.1 | LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED |
| CAI8039059.1 | LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED |
| CAI8039061.1 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD |
| CAI8039060.1 | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD |
| CAI8039062.1 | |
| CAI8039063.1 | TUDOR DOMAIN CONTAINING PROTEIN |
| CAI8039064.1 | |
| CAI8039065.1 | |
| CAI8039067.1 | |
| CAI8039066.1 | |
| CAI8039068.1 | |
| CAI8039069.1 | |
| CAI8039071.1 | NEMITIN (NEURONAL ENRICHED MAP INTERACTING PROTEIN) HOMOLOG |
