About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8038823.1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
CAI8038822.1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
CAI8038821.1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
CAI8038820.1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
CAI8038819.1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
CAI8038826.1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
CAI8038827.1ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE
CAI8038828.1
CAI8038829.1SEC61 SUBUNIT BETA
CAI8038831.1
CAI8038830.1
CAI8038832.1
CAI8038833.1WNT RELATED
CAI8038836.1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8
CAI8038835.1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8
CAI8038834.1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8
CAI8038837.1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8
CAI8038839.1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I
CAI8038838.1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I
CAI8038840.13'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1
CAI8038841.13'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1
CAI8038845.1DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN
CAI8038844.1DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN
CAI8038843.1DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN
CAI8038842.1DISKS LARGE-ASSOCIATED PROTEIN DAP SAP90/PSD-95-ASSOCIATED PROTEIN
CAI8038846.1
CAI8038847.1
CAI8038848.1
CAI8038849.13'(2'),5'-BISPHOSPHATE NUCLEOTIDASE 1
CAI8038850.1-
CAI8038851.1-
CAI8038852.1-
CAI8038853.1-
CAI8038855.1PACHYTENE CHECKPOINT PROTEIN 2
CAI8038856.1PACHYTENE CHECKPOINT PROTEIN 2
CAI8038854.1PACHYTENE CHECKPOINT PROTEIN 2
CAI8038857.1
CAI8038860.1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
CAI8038859.1PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN
CAI8038858.1
CAI8038861.1
CAI8038862.1
CAI8038863.1
CAI8038864.1
CAI8038865.1
CAI8038866.1
CAI8038867.1MYOTROPHIN
CAI8038868.1CENTROSOMAL PROTEIN OF 76 KDA
CAI8038869.1
CAI8038870.1BROMODOMAIN CONTAINING PROTEIN
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