Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8038921.1 | MALONYL-COA ACP TRANSACYLASE, ACP-BINDING |
| CAI8038922.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8038927.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8038928.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8038926.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8038925.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8038924.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8038923.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| CAI8038929.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8038930.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| CAI8038932.1 | ANKYRIN REPEAT PROTEIN |
| CAI8038931.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| CAI8038933.1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
| CAI8038934.1 | LATROPHILIN RECEPTOR-LIKE PROTEIN A |
| CAI8038935.1 | ADENINE DEAMINASE |
| CAI8038936.1 | |
| CAI8038937.1 | N4BP1-RELATED |
| CAI8038938.1 | N4BP1-RELATED |
| CAI8038939.1 | ENOYL-COA HYDRATASE |
| CAI8038940.1 | |
| CAI8038941.1 | |
| CAI8038942.1 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
| CAI8038944.1 | GH04942P |
| CAI8038943.1 | GH04942P |
| CAI8038945.1 | GH04942P |
| CAI8038946.1 | GH04942P |
| CAI8038947.1 | GH04942P |
| CAI8038948.1 | GH04942P |
| CAI8038949.1 | TANDEM PH DOMAIN CONTAINING PROTEIN |
| CAI8038951.1 | UNCHARACTERIZED |
| CAI8038950.1 | UNCHARACTERIZED |
| CAI8038952.1 | |
| CAI8038953.1 | INTEGRIN BETA SUBUNIT |
| CAI8038958.1 | RNA 3' TERMINAL PHOSPHATE CYCLASE |
| CAI8038957.1 | RNA 3' TERMINAL PHOSPHATE CYCLASE |
| CAI8038956.1 | RNA 3' TERMINAL PHOSPHATE CYCLASE |
| CAI8038955.1 | RNA 3' TERMINAL PHOSPHATE CYCLASE |
| CAI8038954.1 | RNA 3' TERMINAL PHOSPHATE CYCLASE |
| CAI8038959.1 | RNA 3' TERMINAL PHOSPHATE CYCLASE |
| CAI8038960.1 | |
| CAI8038961.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| CAI8038962.1 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| CAI8038964.1 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| CAI8038965.1 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| CAI8038963.1 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| CAI8038966.1 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| CAI8038967.1 | |
| CAI8038969.1 | N6-ADENOSINE-METHYLTRANSFERASE |
| CAI8038970.1 | N6-ADENOSINE-METHYLTRANSFERASE |
| CAI8038968.1 | N6-ADENOSINE-METHYLTRANSFERASE |
