About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8037271.1CYTOKINE RECEPTOR
CAI8037272.1
CAI8037273.1
CAI8037275.1UNCHARACTERIZED
CAI8037274.1UNCHARACTERIZED
CAI8037276.1RIBONUCLEASE
CAI8037277.1
CAI8037278.1
CAI8037279.1TYROSINE-PROTEIN KINASE RECEPTOR
CAI8037280.1TYROSINE-PROTEIN KINASE RECEPTOR
CAI8037281.1
CAI8037283.1NUCLEAR RESPIRATORY FACTOR 1
CAI8037284.1NUCLEAR RESPIRATORY FACTOR 1
CAI8037282.1
CAI8037285.1NUCLEAR RESPIRATORY FACTOR 1
CAI8037286.1PHOSPHOENOLPYRUVATE SYNTHASE-RELATED
CAI8037287.1PHOSPHOENOLPYRUVATE SYNTHASE-RELATED
CAI8037288.1CARBONIC ANHYDRASE
CAI8037289.1CARBONIC ANHYDRASE
CAI8037290.1
CAI8037291.1
CAI8037293.1NURIM
CAI8037292.1NURIM
CAI8037294.1
CAI8037295.1
CAI8037300.1NURIM
CAI8037299.1NURIM
CAI8037297.1NURIM
CAI8037298.1NURIM
CAI8037296.1NURIM
CAI8037301.1NURIM
CAI8037302.1NURIM
CAI8037303.1NURIM
CAI8037304.1
CAI8037306.1
CAI8037307.1
CAI8037305.1
CAI8037308.1
CAI8037309.1
CAI8037310.1
CAI8037311.1
CAI8037312.1
CAI8037317.1
CAI8037316.1
CAI8037314.1
CAI8037315.1
CAI8037313.1
CAI8037318.1
CAI8037319.1ABC TRANSPORTER G FAMILY MEMBER 28
CAI8037320.1
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