Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8036969.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 115 |
| CAI8036974.1 | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED |
| CAI8036973.1 | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED |
| CAI8036972.1 | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED |
| CAI8036975.1 | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED |
| CAI8036976.1 | |
| CAI8036977.1 | |
| CAI8036981.1 | SI:DKEY-57N24.6 |
| CAI8036980.1 | SI:DKEY-57N24.6 |
| CAI8036979.1 | SI:DKEY-57N24.6 |
| CAI8036978.1 | |
| CAI8036982.1 | SI:DKEY-57N24.6 |
| CAI8036983.1 | SI:DKEY-57N24.6 |
| CAI8036984.1 | MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25 |
| CAI8036985.1 | VEZATIN |
| CAI8036986.1 | |
| CAI8036987.1 | |
| CAI8036988.1 | D123 PROTEIN |
| CAI8036989.1 | D123 PROTEIN |
| CAI8036991.1 | COATOMER SUBUNIT GAMMA |
| CAI8036990.1 | |
| CAI8036992.1 | COATOMER SUBUNIT GAMMA |
| CAI8036994.1 | DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 3 |
| CAI8036993.1 | DOLICHOL-PHOSPHATE MANNOSYLTRANSFERASE SUBUNIT 3 |
| CAI8036996.1 | CARNITINE O-ACYLTRANSFERASE |
| CAI8036995.1 | CARNITINE O-ACYLTRANSFERASE |
| CAI8036997.1 | CARNITINE O-ACYLTRANSFERASE |
| CAI8036998.1 | CARNITINE O-ACYLTRANSFERASE |
| CAI8036999.1 | CARNITINE O-ACYLTRANSFERASE |
| CAI8037000.1 | CARNITINE O-ACYLTRANSFERASE |
| CAI8037001.1 | CARNITINE O-ACYLTRANSFERASE |
| CAI8037002.1 | |
| CAI8037004.1 | NUCLEOLAR COMPLEX PROTEIN 4 |
| CAI8037005.1 | NUCLEOLAR COMPLEX PROTEIN 4 |
| CAI8037003.1 | XAP-5 PROTEIN-RELATED |
| CAI8037008.1 | THUMP DOMAIN-CONTAINING |
| CAI8037007.1 | THUMP DOMAIN-CONTAINING |
| CAI8037006.1 | THUMP DOMAIN-CONTAINING |
| CAI8037009.1 | SORTING NEXIN |
| CAI8037010.1 | |
| CAI8037011.1 | FERRITIN |
| CAI8037012.1 | FERRITIN |
| CAI8037013.1 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
| CAI8037014.1 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
| CAI8037015.1 | |
| CAI8037017.1 | PHD FINGER PROTEINS |
| CAI8037016.1 | PHD FINGER PROTEINS |
| CAI8037018.1 | BROMODOMAIN CONTAINING PROTEIN |
| CAI8037019.1 | BROMODOMAIN CONTAINING PROTEIN |
| CAI8037021.1 | MOLTING PROTEIN MLT-4 |
