Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8036776.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036777.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036773.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036775.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036774.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036770.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036771.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036772.1 | CYTOKINE RECEPTOR |
| CAI8036779.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036782.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036781.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036780.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036783.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036784.1 | |
| CAI8036785.1 | |
| CAI8036787.1 | CYTOKINE RECEPTOR |
| CAI8036786.1 | |
| CAI8036788.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8036789.1 | |
| CAI8036790.1 | |
| CAI8036793.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8036792.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8036791.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8036794.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8036795.1 | DIACYLGLYCEROL LIPASE HOMOLOG-RELATED |
| CAI8036796.1 | |
| CAI8036797.1 | |
| CAI8036798.1 | EXPRESSED PROTEIN |
| CAI8036799.1 | |
| CAI8036800.1 | |
| CAI8036801.1 | |
| CAI8036802.1 | |
| CAI8036803.1 | BCS1 AAA-TYPE ATPASE |
| CAI8036805.1 | DELTEX-RELATED |
| CAI8036804.1 | DELTEX-RELATED |
| CAI8036806.1 | BCS1 AAA-TYPE ATPASE |
| CAI8036807.1 | DELTEX-RELATED |
| CAI8036808.1 | |
| CAI8036809.1 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
| CAI8036810.1 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
| CAI8036811.1 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
| CAI8036812.1 | |
| CAI8036813.1 | |
| CAI8036814.1 | |
| CAI8036815.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8036817.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
| CAI8036816.1 | |
| CAI8036818.1 | |
| CAI8036819.1 | |
| CAI8036820.1 |
