Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8036571.1 | PROMININ PROM PROTEIN |
| CAI8036572.1 | CARBON CATABOLITE REPRESSOR PROTEIN 4 |
| CAI8036573.1 | |
| CAI8036575.1 | SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN |
| CAI8036574.1 | SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN |
| CAI8036576.1 | SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN |
| CAI8036577.1 | SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN |
| CAI8036578.1 | SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN |
| CAI8036580.1 | SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN |
| CAI8036579.1 | SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN |
| CAI8036581.1 | SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN |
| CAI8036582.1 | SODIUM LEAK CHANNEL NON-SELECTIVE PROTEIN |
| CAI8036583.1 | |
| CAI8036587.1 | UNCHARACTERIZED |
| CAI8036586.1 | UNCHARACTERIZED |
| CAI8036585.1 | UNCHARACTERIZED |
| CAI8036584.1 | UNCHARACTERIZED |
| CAI8036588.1 | UNCHARACTERIZED |
| CAI8036589.1 | UNCHARACTERIZED |
| CAI8036590.1 | AGAP001623-PA |
| CAI8036595.1 | MITOFILIN |
| CAI8036594.1 | MITOFILIN |
| CAI8036593.1 | MITOFILIN |
| CAI8036592.1 | |
| CAI8036591.1 | |
| CAI8036596.1 | MITOFILIN |
| CAI8036597.1 | 4.1 G PROTEIN |
| CAI8036598.1 | |
| CAI8036599.1 | |
| CAI8036600.1 | |
| CAI8036601.1 | |
| CAI8036602.1 | |
| CAI8036603.1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
| CAI8036605.1 | BONUS, ISOFORM C-RELATED |
| CAI8036604.1 | BONUS, ISOFORM C-RELATED |
| CAI8036606.1 | TENASCIN |
| CAI8036607.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8036609.1 | |
| CAI8036610.1 | |
| CAI8036608.1 | |
| CAI8036611.1 | |
| CAI8036614.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8036615.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8036613.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8036612.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8036617.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8036616.1 | ADHESION G-PROTEIN COUPLED RECEPTOR V1 |
| CAI8036618.1 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
| CAI8036619.1 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
| CAI8036620.1 |
