About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8036421.1
CAI8036422.1
CAI8036423.1ATPASE-LIKE PROTEIN
CAI8036424.1INTEGRAL MEMBRANE TRANSPORT PROTEIN-RELATED
CAI8036425.1TRANSLATION FACTOR GUF1-RELATED
CAI8036426.1TRANSLATION FACTOR GUF1-RELATED
CAI8036427.1TRANSLATION FACTOR GUF1-RELATED
CAI8036428.1OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
CAI8036429.1RESISTANCE PROTEIN MDTM, PUTATIVE-RELATED-RELATED
CAI8036430.1FLAVIN REDUCTASE
CAI8036431.1ANAEROBIC MAGNESIUM-PROTOPORPHYRIN IX MONOMETHYL ESTER CYCLASE-RELATED
CAI8036432.1POLYKETIDE SYNTHASE-RELATED
CAI8036434.14-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE, CHLOROPLASTIC
CAI8036433.14-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE, CHLOROPLASTIC
CAI8036436.1DIMETHYLADENOSINE TRANSFERASE
CAI8036435.1DIMETHYLADENOSINE TRANSFERASE
CAI8036437.1DEHYDROGENASES, SHORT CHAIN
CAI8036438.1DEHYDROGENASES, SHORT CHAIN
CAI8036439.1
CAI8036440.1TREHALOSE-6-PHOSPHATE SYNTHASE
CAI8036441.1NADH-QUINONE OXIDOREDUCTASE SUBUNIT F
CAI8036442.1ACYL-COA DEHYDROGENASE
CAI8036443.1BLR3430 PROTEIN
CAI8036444.1ACETYL-COA C-ACETYLTRANSFERASE
CAI8036445.1XANTHINE DEHYDROGENASE SUBUNIT C-RELATED
CAI8036446.1TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEIN
CAI8036450.16,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASE
CAI8036449.16,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASE
CAI8036448.16,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASE
CAI8036447.16,7-DIMETHYL-8-RIBITYLLUMAZINE SYNTHASE DMRL SYNTHASE LUMAZINE SYNTHASE
CAI8036451.1ALKANESULFONATE MONOOXYGENASE
CAI8036452.1DEHYDROGENASES, SHORT CHAIN
CAI8036453.1
CAI8036454.1SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER
CAI8036455.1SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER
CAI8036456.1
CAI8036457.1
CAI8036458.1SLR1406 PROTEIN
CAI8036459.1H REPEAT-ASSOCIATED PREDICTED TRANSPOSASE
CAI8036460.1
CAI8036461.1
CAI8036464.1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
CAI8036466.1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
CAI8036465.1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
CAI8036463.1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
CAI8036462.1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
CAI8036467.1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
CAI8036469.1COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
CAI8036470.1DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED
CAI8036468.1PALMITOYLTRANSFERASE
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