About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8036321.1PHD FINGER PROTEIN 20-RELATED
CAI8036322.1
CAI8036323.1DED DOMAIN-CONTAINING PROTEIN
CAI8036324.1GTP-BINDING PROTEIN HFLX
CAI8036325.1
CAI8036328.1
CAI8036327.1
CAI8036326.1
CAI8036329.1
CAI8036334.1
CAI8036333.1
CAI8036332.1
CAI8036331.1
CAI8036330.1
CAI8036335.1
CAI8036336.1
CAI8036337.1
CAI8036338.1
CAI8036339.1
CAI8036340.1
CAI8036341.1LONG-CHAIN-FATTY-ACID--COA LIGASE
CAI8036342.1PYRROLINE-5-CARBOXYLATE REDUCTASE
CAI8036343.1
CAI8036348.1AAA-FAMILY ATPASE
CAI8036349.1AAA-FAMILY ATPASE
CAI8036347.1AAA-FAMILY ATPASE
CAI8036345.1AAA-FAMILY ATPASE
CAI8036351.1AAA-FAMILY ATPASE
CAI8036350.1AAA-FAMILY ATPASE
CAI8036352.1AAA-FAMILY ATPASE
CAI8036353.1AAA-FAMILY ATPASE
CAI8036354.1AAA-FAMILY ATPASE
CAI8036346.1AAA-FAMILY ATPASE
CAI8036355.1TNF RECEPTOR ASSOCIATED FACTOR
CAI8036344.1
CAI8036356.1PEPTIDASE S8
CAI8036357.1
CAI8036359.1PRE-MRNA SPLICING FACTOR PRP31
CAI8036360.1
CAI8036358.1
CAI8036363.1
CAI8036362.1
CAI8036361.1
CAI8036364.1
CAI8036366.1
CAI8036365.1
CAI8036367.1GTPASE, IMAP FAMILY MEMBER-RELATED
CAI8036368.1GTPASE, IMAP FAMILY MEMBER-RELATED
CAI8036369.1
CAI8036370.1GTPASE, IMAP FAMILY MEMBER-RELATED
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