Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8036218.1 | ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN |
| CAI8036217.1 | SURFACE ANTIGEN BSPA-LIKE-RELATED |
| CAI8036223.1 | ANKYRIN REPEAT CONTAINING |
| CAI8036224.1 | MOLTING PROTEIN MLT-4 |
| CAI8036225.1 | MOLTING PROTEIN MLT-4 |
| CAI8036226.1 | |
| CAI8036227.1 | G PATCH DOMAIN CONTAINING PROTEIN |
| CAI8036229.1 | STAC |
| CAI8036228.1 | STAC |
| CAI8036230.1 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| CAI8036231.1 | FCH AND DOUBLE SH3 DOMAINS PROTEIN |
| CAI8036232.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8036233.1 | KELCH PROTEIN |
| CAI8036234.1 | |
| CAI8036235.1 | |
| CAI8036236.1 | |
| CAI8036237.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8036238.1 | |
| CAI8036239.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036240.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036241.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036243.1 | TWO PORE CALCIUM CHANNEL PROTEIN 1 |
| CAI8036242.1 | TWO PORE CALCIUM CHANNEL PROTEIN 1 |
| CAI8036244.1 | TWO PORE CALCIUM CHANNEL PROTEIN 1 |
| CAI8036245.1 | TWO PORE CALCIUM CHANNEL PROTEIN 1 |
| CAI8036246.1 | |
| CAI8036248.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036247.1 | |
| CAI8036250.1 | |
| CAI8036249.1 | |
| CAI8036251.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036252.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036253.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036254.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036255.1 | |
| CAI8036256.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8036257.1 | |
| CAI8036258.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8036259.1 | |
| CAI8036260.1 | |
| CAI8036265.1 | CELL DIVISION PROTEIN KINASE |
| CAI8036263.1 | MITOGEN-ACTIVATED PROTEIN KINASE |
| CAI8036264.1 | CELL DIVISION PROTEIN KINASE |
| CAI8036262.1 | MITOGEN-ACTIVATED PROTEIN KINASE |
| CAI8036261.1 | |
| CAI8036266.1 | CELL DIVISION PROTEIN KINASE |
| CAI8036267.1 | CELL DIVISION PROTEIN KINASE |
| CAI8036268.1 | CELL DIVISION PROTEIN KINASE |
| CAI8036269.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED |
| CAI8036270.1 |
