Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8035972.1 | ENDORIBONUCLEASE YBEY, CHLOROPLASTIC |
| CAI8035971.1 | ENDORIBONUCLEASE YBEY, CHLOROPLASTIC |
| CAI8035973.1 | WD40 DOMAIN-CONTAINING PROTEIN MIO FAMILY MEMBER |
| CAI8035978.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| CAI8035977.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| CAI8035976.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| CAI8035975.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| CAI8035974.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| CAI8035979.1 | BLR7054 PROTEIN |
| CAI8035980.1 | TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE |
| CAI8035981.1 | AQUAPORIN |
| CAI8035982.1 | ORMDL PROTEINS |
| CAI8035983.1 | ORMDL PROTEINS |
| CAI8035984.1 | |
| CAI8035987.1 | METHYLTRANSFERASE-RELATED |
| CAI8035986.1 | METHYLTRANSFERASE-RELATED |
| CAI8035985.1 | METHYLTRANSFERASE-RELATED |
| CAI8035988.1 | METHYLTRANSFERASE-RELATED |
| CAI8035989.1 | NG5 |
| CAI8035990.1 | UNCHARACTERIZED |
| CAI8035991.1 | SOLUTE CARRIER FAMILY 40 MEMBER |
| CAI8035992.1 | FORMATE DEHYDROGENASE 1 |
| CAI8035993.1 | GLUCOSE-1-PHOSPHATE THYMIDYLTRANSFERASE |
| CAI8035994.1 | |
| CAI8035996.1 | ALADIN/ADRACALIN/AAAS |
| CAI8035998.1 | ALADIN/ADRACALIN/AAAS |
| CAI8035999.1 | ALADIN/ADRACALIN/AAAS |
| CAI8035997.1 | ALADIN/ADRACALIN/AAAS |
| CAI8035995.1 | ALADIN/ADRACALIN/AAAS |
| CAI8036000.1 | ALADIN/ADRACALIN/AAAS |
| CAI8036001.1 | |
| CAI8036002.1 | |
| CAI8036003.1 | BCL-2 RELATED |
| CAI8036004.1 | INO80 COMPLEX SUBUNIT C |
| CAI8036005.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| CAI8036006.1 | RAS-RELATED PROTEIN RAB |
| CAI8036008.1 | SPERM PROTEIN HOMOLOG |
| CAI8036007.1 | 60S RIBOSOMAL PROTEIN L27 |
| CAI8036009.1 | SPERM PROTEIN HOMOLOG |
| CAI8036011.1 | |
| CAI8036013.1 | |
| CAI8036010.1 | |
| CAI8036012.1 | GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 4 FAMILY |
| CAI8036015.1 | CELL DIVISION PROTEIN KINASE |
| CAI8036016.1 | |
| CAI8036017.1 | CELL DIVISION PROTEIN KINASE |
| CAI8036018.1 | MITOGEN-ACTIVATED PROTEIN KINASE |
| CAI8036014.1 | SAP DOMAIN-CONTAINING RIBONUCLEOPROTEIN |
| CAI8036019.1 | NG5 |
| CAI8036020.1 |
