Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8035921.1 | |
| CAI8035922.1 | |
| CAI8035923.1 | |
| CAI8035924.1 | |
| CAI8035925.1 | D-AMINOPEPTIDASE |
| CAI8035926.1 | |
| CAI8035927.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| CAI8035928.1 | ATP-BINDING CASSETTE SUB-FAMILY B |
| CAI8035930.1 | |
| CAI8035929.1 | |
| CAI8035931.1 | |
| CAI8035932.1 | |
| CAI8035933.1 | BETA LACTAMASE DOMAIN |
| CAI8035934.1 | FUMARYLACETOACETATE HYDROLASE DOMAIN-CONTAINING PROTEIN 2A-RELATED |
| CAI8035935.1 | |
| CAI8035936.1 | |
| CAI8035937.1 | DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED |
| CAI8035938.1 | |
| CAI8035939.1 | |
| CAI8035940.1 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| CAI8035941.1 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| CAI8035942.1 | |
| CAI8035943.1 | |
| CAI8035944.1 | |
| CAI8035945.1 | PROLINE-RICH, LACRIMAL 1 |
| CAI8035946.1 | |
| CAI8035947.1 | |
| CAI8035948.1 | SPLICING FACTOR 3B, SUBUNIT 1-RELATED |
| CAI8035949.1 | HOMEOBOX PROTEIN ARISTALESS |
| CAI8035951.1 | MUTATED IN BLADDER CANCER 1 |
| CAI8035950.1 | |
| CAI8035952.1 | MUTATED IN BLADDER CANCER 1 |
| CAI8035953.1 | MUTATED IN BLADDER CANCER 1 |
| CAI8035956.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI8035954.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| CAI8035955.1 | ATP-DEPENDENT RNA HELICASE DBP3 |
| CAI8035957.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI8035958.1 | ATP-DEPENDENT RNA HELICASE RHLE-RELATED |
| CAI8035959.1 | HL07962P-RELATED |
| CAI8035960.1 | HL07962P-RELATED |
| CAI8035961.1 | |
| CAI8035964.1 | GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |
| CAI8035962.1 | GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |
| CAI8035963.1 | GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |
| CAI8035965.1 | GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |
| CAI8035966.1 | GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2 |
| CAI8035970.1 | SERINE-THREONINE PROTEIN KINASE |
| CAI8035969.1 | ANKYRIN REPEAT CONTAINING |
| CAI8035968.1 | ANKYRIN REPEAT CONTAINING |
| CAI8035967.1 | SERINE-THREONINE PROTEIN KINASE |
