About Geodia barretti

Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Geodia barrettiPoriferadeep-sea spongeDeep sea30-2000Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483)519541

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Geodia_barretti_n_2022_12144.8MbScaffold2024CASHTH01pharmaceutical biosciences, uppsala universityPRJEB5804671.50%31,884

References
TitleJournalPubmed ID
Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae)G3 (Bethesda)37619978

Gene Information

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Gene IDDescription
CAI8035871.1PHOSPHATE TRANSPORT SYSTEM PERMEASE PROTEIN
CAI8035872.1PHOSPHATE REGULON SENSOR PROTEIN PHOR
CAI8035873.1REGULATOR OF RPOS
CAI8035875.1ENOYL-COA HYDRATASE-RELATED
CAI8035874.1ENOYL-COA HYDRATASE-RELATED
CAI8035876.13-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED
CAI8035877.13-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE
CAI8035878.1VITAMIN B12-DEPENDENT RIBONUCLEOTIDE REDUCTASE
CAI8035879.1
CAI8035880.1VITAMIN B12-DEPENDENT RIBONUCLEOTIDE REDUCTASE
CAI8035881.1TRANSCRIPTIONAL REPRESSOR NRDR
CAI8035882.1ABC TRANSPORTER ATP-BINDING PROTEIN
CAI8035883.12-KETO-3-DEOXY-L-RHAMNONATE ALDOLASE
CAI8035884.1SLL0198 PROTEIN-RELATED
CAI8035885.1DEHYDROGENASES, SHORT CHAIN
CAI8035886.1D-GALACTONATE DEHYDRATASE-RELATED
CAI8035887.1
CAI8035888.1EF-HAND DOMAIN C-TERMINAL CONTAINING PROTEIN
CAI8035891.1CELL DIVISION CYCLE 16,23,27
CAI8035890.1CELL DIVISION CYCLE 16,23,27
CAI8035889.1
CAI8035892.1CELL DIVISION CYCLE 16,23,27
CAI8035893.1CELL DIVISION CYCLE 16,23,27
CAI8035894.1KRUEPPEL-LIKE TRANSCRIPTION FACTOR
CAI8035895.1GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE
CAI8035897.1ENDOPLASMIC RETICULUM RESIDENT PROTEIN 44
CAI8035896.1ENDOPLASMIC RETICULUM RESIDENT PROTEIN 44
CAI8035898.1ENDOPLASMIC RETICULUM RESIDENT PROTEIN 44
CAI8035899.1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
CAI8035900.13-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN
CAI8035901.1LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED
CAI8035902.1DNA HELICASE RECQ FAMILY MEMBER
CAI8035903.1INDOLEAMINE 2,3-DIOXYGENASE
CAI8035904.1INDOLEAMINE 2,3-DIOXYGENASE
CAI8035905.1
CAI8035906.1
CAI8035907.1
CAI8035910.1
CAI8035911.1
CAI8035909.1
CAI8035908.1
CAI8035912.1
CAI8035913.1TYROSINE-PROTEIN KINASE RECEPTOR
CAI8035917.1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
CAI8035915.1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
CAI8035916.1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
CAI8035914.1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
CAI8035918.1PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
CAI8035919.160S/50S RIBOSOMAL PROTEIN L6/L9
CAI8035920.160S/50S RIBOSOMAL PROTEIN L6/L9
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