Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8035571.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2D |
| CAI8035572.1 | |
| CAI8035573.1 | |
| CAI8035574.1 | PROTEIN CBG23806 |
| CAI8035577.1 | |
| CAI8035578.1 | |
| CAI8035576.1 | |
| CAI8035575.1 | |
| CAI8035579.1 | PROTEIN SIDEKICK |
| CAI8035581.1 | PROTEIN SIDEKICK |
| CAI8035580.1 | PROTEIN SIDEKICK |
| CAI8035584.1 | PROTEIN SIDEKICK |
| CAI8035583.1 | PROTEIN SIDEKICK |
| CAI8035582.1 | PROTEIN SIDEKICK |
| CAI8035585.1 | PROTEIN SIDEKICK |
| CAI8035586.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| CAI8035587.1 | |
| CAI8035588.1 | |
| CAI8035589.1 | |
| CAI8035590.1 | |
| CAI8035591.1 | |
| CAI8035594.1 | REGULATOR OF RPOS |
| CAI8035593.1 | REGULATOR OF RPOS |
| CAI8035592.1 | REGULATOR OF RPOS |
| CAI8035595.1 | REGULATOR OF RPOS |
| CAI8035596.1 | REGULATOR OF RPOS |
| CAI8035597.1 | REGULATOR OF RPOS |
| CAI8035598.1 | |
| CAI8035601.1 | AQUAPORIN NIP2-1 |
| CAI8035600.1 | AQUAPORIN NIP2-1 |
| CAI8035599.1 | AQUAPORIN NIP2-1 |
| CAI8035602.1 | PERIPLASMIC PHOSPHATE BINDING COMPONENT OF PHOSPHATE ABC TRANSPORTER |
| CAI8035603.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8035604.1 | |
| CAI8035605.1 | LUCIFERASE-LIKE MONOOXYGENASE |
| CAI8035607.1 | DRAB11-RELATED |
| CAI8035606.1 | RAS-RELATED PROTEIN RAB |
| CAI8035609.1 | EPH RECEPTOR A5 |
| CAI8035608.1 | EPH RECEPTOR A5 |
| CAI8035610.1 | |
| CAI8035611.1 | |
| CAI8035612.1 | METHYLENETETRAHYDROFOLATE REDUCTASE |
| CAI8035613.1 | |
| CAI8035614.1 | TRANSPOSABLE ELEMENT-RELATED |
| CAI8035615.1 | |
| CAI8035617.1 | |
| CAI8035616.1 | |
| CAI8035618.1 | |
| CAI8035619.1 | POLY ADP-RIBOSE GLYCOHYDROLASE |
| CAI8035620.1 |
