Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8035522.1 | CARBOHYDRATE SULFOTRANSFERASE |
| CAI8035521.1 | CARBOHYDRATE SULFOTRANSFERASE |
| CAI8035524.1 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| CAI8035523.1 | |
| CAI8035525.1 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| CAI8035526.1 | HEPARAN SULFATE SULFOTRANSFERASE |
| CAI8035530.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| CAI8035528.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| CAI8035529.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| CAI8035527.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| CAI8035531.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| CAI8035532.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| CAI8035533.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 20 |
| CAI8035535.1 | |
| CAI8035536.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8035534.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| CAI8035537.1 | |
| CAI8035538.1 | |
| CAI8035539.1 | |
| CAI8035540.1 | |
| CAI8035541.1 | |
| CAI8035542.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8035543.1 | |
| CAI8035544.1 | I_LWEQ DOMAIN-CONTAINING PROTEIN |
| CAI8035550.1 | GLYCOSIDASE FAMILY 31 |
| CAI8035548.1 | GLYCOSIDASE FAMILY 31 |
| CAI8035547.1 | GLYCOSIDASE FAMILY 31 |
| CAI8035551.1 | HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G03140)-RELATED |
| CAI8035549.1 | GLYCOSIDASE FAMILY 31 |
| CAI8035546.1 | HYDROLASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G03140)-RELATED |
| CAI8035545.1 | |
| CAI8035553.1 | GLYCOSIDASE FAMILY 31 |
| CAI8035555.1 | GLYCOSIDASE FAMILY 31 |
| CAI8035554.1 | GLYCOSIDASE FAMILY 31 |
| CAI8035552.1 | |
| CAI8035556.1 | GLYCOSIDASE FAMILY 31 |
| CAI8035557.1 | GLYCOSIDASE FAMILY 31 |
| CAI8035558.1 | |
| CAI8035563.1 | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN |
| CAI8035565.1 | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN |
| CAI8035564.1 | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN |
| CAI8035566.1 | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN |
| CAI8035562.1 | |
| CAI8035561.1 | |
| CAI8035560.1 | |
| CAI8035559.1 | |
| CAI8035567.1 | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN |
| CAI8035568.1 | P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN |
| CAI8035569.1 | |
| CAI8035570.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2D |
