Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8036621.1 | TNF RECEPTOR ASSOCIATED FACTOR |
| CAI8036622.1 | |
| CAI8036623.1 | |
| CAI8036624.1 | |
| CAI8036625.1 | |
| CAI8036626.1 | |
| CAI8036627.1 | |
| CAI8036631.1 | EPH RECEPTOR A5 |
| CAI8036632.1 | EPH RECEPTOR A5 |
| CAI8036630.1 | EPH RECEPTOR A5 |
| CAI8036629.1 | EPH RECEPTOR A5 |
| CAI8036628.1 | EPH RECEPTOR A5 |
| CAI8036636.1 | |
| CAI8036635.1 | |
| CAI8036634.1 | EPH RECEPTOR A5 |
| CAI8036633.1 | EPH RECEPTOR A5 |
| CAI8036637.1 | |
| CAI8036638.1 | EPH RECEPTOR A5 |
| CAI8036639.1 | EPH RECEPTOR A5 |
| CAI8036640.1 | EPH RECEPTOR A5 |
| CAI8036641.1 | EPH RECEPTOR A5 |
| CAI8036643.1 | EPH RECEPTOR A5 |
| CAI8036642.1 | EPH RECEPTOR A5 |
| CAI8036646.1 | |
| CAI8036644.1 | |
| CAI8036645.1 | |
| CAI8036650.1 | INNER MEMBRANE TRANSPORT PROTEIN YAJR |
| CAI8036649.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8036648.1 | INNER MEMBRANE TRANSPORT PROTEIN YAJR |
| CAI8036647.1 | INNER MEMBRANE TRANSPORT PROTEIN YAJR |
| CAI8036651.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8036652.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8036653.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8036654.1 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 |
| CAI8036656.1 | |
| CAI8036655.1 | |
| CAI8036657.1 | |
| CAI8036658.1 | |
| CAI8036659.1 | |
| CAI8036660.1 | |
| CAI8036664.1 | |
| CAI8036663.1 | |
| CAI8036662.1 | |
| CAI8036661.1 | |
| CAI8036665.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036666.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036667.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| CAI8036668.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036669.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| CAI8036674.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
