Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8036830.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036832.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036831.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036829.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036824.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036822.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036821.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036823.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036826.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036825.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036827.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036828.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036834.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| CAI8036833.1 | |
| CAI8036835.1 | |
| CAI8036836.1 | |
| CAI8036837.1 | |
| CAI8036838.1 | XYLOGLUCANASE (EUROFUNG) |
| CAI8036839.1 | HYDROXYMETHYLGLUTARYL-COA LYASE |
| CAI8036840.1 | ARGINASE/AGMATINASE |
| CAI8036841.1 | S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME |
| CAI8036842.1 | ABC TRANSPORTER, ATP-BINDING PROTEIN |
| CAI8036844.1 | MOXR FAMILY PROTEIN |
| CAI8036843.1 | MOXR FAMILY PROTEIN |
| CAI8036845.1 | L-AMINO ACID N-ACETYLTRANSFERASE |
| CAI8036846.1 | |
| CAI8036847.1 | |
| CAI8036848.1 | |
| CAI8036849.1 | CONDENSIN COMPLEX SUBUNIT 3-RELATED |
| CAI8036850.1 | CONDENSIN COMPLEX SUBUNIT 3-RELATED |
| CAI8036851.1 | CONDENSIN COMPLEX SUBUNIT 3-RELATED |
| CAI8036852.1 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| CAI8036853.1 | KELCH PROTEIN |
| CAI8036854.1 | |
| CAI8036855.1 | |
| CAI8036856.1 | |
| CAI8036857.1 | |
| CAI8036858.1 | |
| CAI8036859.1 | |
| CAI8036860.1 | |
| CAI8036861.1 | |
| CAI8036862.1 | SODIUM/CALCIUM EXCHANGER |
| CAI8036863.1 | |
| CAI8036864.1 | |
| CAI8036866.1 | CYTOKINE RECEPTOR |
| CAI8036865.1 | CYTOKINE RECEPTOR |
| CAI8036867.1 | |
| CAI8036868.1 | 39S RIBOSOMAL PROTEIN L12 |
| CAI8036869.1 | 39S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL |
| CAI8036870.1 | 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL |
