Geodia barretti is a species of deep-sea sponge in the family Geodiidae, commonly found in cold-water ecosystems of the North Atlantic Ocean. This species thrives in nutrient-rich, cold-water environments and plays a crucial role in deep-sea ecosystems by filtering large volumes of water, contributing to nutrient cycling, and providing habitat for various marine organisms. Its unique adaptations to cold and high-pressure conditions make it an important subject for studying deep-sea biodiversity and ecological processes.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Geodia barretti | Porifera | deep-sea sponge | Deep sea | 30-2000 | Kosterfjord National Park, Sweden, West of Yttre Vattenholmen (58.876233, 11.101483) | 519541 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| Geodia_barretti_n_2022_12 | 144.8Mb | Scaffold | 2024 | CASHTH01 | pharmaceutical biosciences, uppsala university | PRJEB58046 | 71.50% | 31,884 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Whole genome sequence of the deep-sea sponge Geodia barretti (Metazoa, Porifera, Demospongiae) | G3 (Bethesda) | 37619978 |
| Gene ID | Description |
|---|---|
| CAI8037421.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8037423.1 | DNA2/NAM7 HELICASE FAMILY |
| CAI8037420.1 | CANCER/TESTIS ANTIGEN 55 |
| CAI8037424.1 | RAGULATOR COMPLEX PROTEIN LAMTOR5 |
| CAI8037425.1 | SERINE PEPTIDASE S9 FAMILY MEMBER |
| CAI8037426.1 | BCL-2 RELATED |
| CAI8037427.1 | |
| CAI8037428.1 | TENSIN |
| CAI8037429.1 | TENSIN |
| CAI8037430.1 | TENSIN |
| CAI8037431.1 | TENSIN |
| CAI8037432.1 | PHOSPHATASE WITH HOMOLOGY TO TENSIN |
| CAI8037433.1 | |
| CAI8037434.1 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| CAI8037435.1 | |
| CAI8037436.1 | |
| CAI8037437.1 | |
| CAI8037438.1 | |
| CAI8037439.1 | |
| CAI8037440.1 | |
| CAI8037441.1 | |
| CAI8037442.1 | |
| CAI8037443.1 | |
| CAI8037445.1 | PROTEIN PHOSPATASE 3 REGULATORY SUBUNIT B ALPHA ISOFORM TYPE 1 |
| CAI8037444.1 | PROTEIN PHOSPATASE 3 REGULATORY SUBUNIT B ALPHA ISOFORM TYPE 1 |
| CAI8037446.1 | PROTEIN PHOSPATASE 3 REGULATORY SUBUNIT B ALPHA ISOFORM TYPE 1 |
| CAI8037447.1 | |
| CAI8037448.1 | - |
| CAI8037450.1 | - |
| CAI8037449.1 | - |
| CAI8037451.1 | - |
| CAI8037453.1 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED |
| CAI8037452.1 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED |
| CAI8037454.1 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED |
| CAI8037455.1 | DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 7-RELATED |
| CAI8037456.1 | PROTEIN HAPLESS 2 |
| CAI8037457.1 | UNCHARACTERIZED |
| CAI8037458.1 | PECANEX |
| CAI8037459.1 | PECANEX |
| CAI8037462.1 | BTB/POZ DOMAIN-CONTAINING PROTEIN 9 |
| CAI8037461.1 | BTB/POZ DOMAIN-CONTAINING PROTEIN 9 |
| CAI8037460.1 | BTB/POZ DOMAIN-CONTAINING PROTEIN 9 |
| CAI8037463.1 | BTB/POZ DOMAIN-CONTAINING PROTEIN 9 |
| CAI8037464.1 | KINESIN LIGHT CHAIN |
| CAI8037465.1 | RING ZINC FINGER PROTEIN |
| CAI8037470.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8037469.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8037467.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8037468.1 | ATP-DEPENDENT RNA HELICASE |
| CAI8037466.1 | ATP-DEPENDENT RNA HELICASE |
